Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Y_RNA.708-201ENST00000516950 96 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 IL7-206ENST00000520269 456 ntTSL 3 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 MIR378H-201ENST00000579966 83 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 AC011500.1-201ENST00000601963 469 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 AC104662.1-201ENST00000604448 511 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 AC121334.2-201ENST00000605387 271 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VARS2Q5ST30 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.95□□□□□ -1.14
VARS2Q5ST30 AL122126.1-201ENST00000546905 1318 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
VARS2Q5ST30 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VARS2Q5ST30 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VARS2Q5ST30 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.95□□□□□ -1.14
VARS2Q5ST30 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
VARS2Q5ST30 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VARS2Q5ST30 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 TTC3P1-201ENST00000399586 6081 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC016582.1-202ENST00000636341 2982 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 RNU6-552P-201ENST00000362869 119 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 Y_RNA.200-201ENST00000364018 102 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 Y_RNA.378-201ENST00000365652 113 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 RNU6-1154P-201ENST00000391001 104 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 EIF4E2P1-201ENST00000393781 255 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 RPL24P2-201ENST00000421023 475 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC019080.2-201ENST00000453859 394 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 NF1P3-201ENST00000457709 450 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 RPS3AP41-201ENST00000462701 778 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC103987.1-201ENST00000473394 348 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC009153.1-201ENST00000485799 496 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC009901.1-201ENST00000506703 541 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 RNU6-1038P-201ENST00000516516 104 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 RNU6-1308P-201ENST00000516817 103 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC090136.1-201ENST00000520009 240 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AP006587.4-201ENST00000526053 529 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC022884.2-201ENST00000578535 580 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC005070.2-201ENST00000604391 260 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC010900.2-201ENST00000604508 210 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 HMGB1P50-201ENST00000605814 607 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC007347.2-201ENST00000623044 180 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 OR4G1P-202ENST00000641173 1788 ntBASIC7.94□□□□□ -1.14
VARS2Q5ST30 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
VARS2Q5ST30 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.94□□□□□ -1.14
VARS2Q5ST30 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VARS2Q5ST30 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 TDGF1P3-202ENST00000602699 2710 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 AC131392.2-201ENST00000505635 4332 ntBASIC7.93□□□□□ -1.14
VARS2Q5ST30 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
VARS2Q5ST30 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms