Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 METTL21EP-201ENST00000298105 713 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 RNU6-236P-201ENST00000363886 106 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 LUZP4P1-201ENST00000415420 344 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL807761.1-201ENST00000417622 171 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 RPL7P34-201ENST00000433316 712 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 FTH1P16-201ENST00000435241 552 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC092170.1-201ENST00000440211 356 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 RPS11P7-201ENST00000442125 465 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 SETD6P1-201ENST00000444575 317 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL050341.1-201ENST00000447743 313 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 MRPL35P2-201ENST00000448009 511 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC069304.1-201ENST00000491593 704 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 OR51K1P-201ENST00000510214 950 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 BRD9P1-201ENST00000529855 560 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 OR7E128P-201ENST00000532736 1024 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 RPL10P14-201ENST00000565265 298 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL022161.1-201ENST00000604390 213 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC080013.6-201ENST00000606185 215 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 FAM25E-202ENST00000608562 189 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AC013470.4-201ENST00000619978 986 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 MIR6810-201ENST00000622701 70 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL353662.3-201ENST00000625131 237 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 CYP4F35P-202ENST00000636121 390 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL353796.1-201ENST00000561542 3241 ntBASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC44A4Q53GD3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RNU6-353P-201ENST00000364266 108 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RNU4-68P-201ENST00000364314 141 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RNA5SP91-201ENST00000390902 119 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AL133268.1-201ENST00000405676 1401 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RNA5SP498-201ENST00000411342 120 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AL445213.1-201ENST00000412589 747 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RPS7P9-201ENST00000414704 586 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RPS3AP37-201ENST00000419176 745 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 CYCSP11-201ENST00000436426 315 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RPS26P30-201ENST00000443431 335 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 RPL21P133-201ENST00000443666 476 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC004022.1-201ENST00000447766 1066 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AZGP1P2-201ENST00000454506 345 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC090114.3-201ENST00000479267 829 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms