Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MIR6862-1-201ENST00000613016 70 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AL050303.3-201ENST00000613704 284 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 MIR6862-2-201ENST00000614755 70 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 CDRT1-208ENST00000630868 794 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AL121594.5-201ENST00000631724 573 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC120338.1-201ENST00000625074 1541 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC38Q502W7 AC009229.4-201ENST00000623854 1947 ntBASIC5.46□□□□□ -1.54
CCDC38Q502W7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC38Q502W7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC046144.1-201ENST00000478559 1853 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC100778.3-201ENST00000580060 1750 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC022031.1-201ENST00000585985 2593 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC38Q502W7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC38Q502W7 RNU6-353P-201ENST00000364266 108 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 ZNF602P-201ENST00000405929 924 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 MTATP6P31-201ENST00000406985 692 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 RNU2-6P-201ENST00000411404 190 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 MTCO2P8-201ENST00000412213 658 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AP000281.1-201ENST00000444036 316 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 MRPL35P2-201ENST00000448009 511 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AL672138.1-201ENST00000450604 1015 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 RPL37P3-201ENST00000456825 293 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 RNU7-140P-201ENST00000459546 60 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 RPL6P9-201ENST00000466502 859 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 MTATP6P1-201ENST00000514057 681 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC091163.3-201ENST00000518269 1144 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 NRBF2P4-201ENST00000520874 850 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC008562.1-201ENST00000521763 330 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC087897.1-201ENST00000550134 156 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 MIR4760-201ENST00000585040 80 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 NTAN1P1-201ENST00000603150 646 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 CYCSP41-201ENST00000616920 296 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC015871.5-202ENST00000623252 701 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 CR392039.4-201ENST00000624968 501 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AC092608.3-201ENST00000625017 386 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 MIR4302-201ENST00000638058 60 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 OR2L1P-202ENST00000641567 1023 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 AL596275.2-204ENST00000641628 552 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AL596275.2-206ENST00000641957 626 ntBASIC5.45□□□□□ -1.54
CCDC38Q502W7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCDC38Q502W7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC38Q502W7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC38Q502W7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL022393.1-201ENST00000625142 1677 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 RN7SKP153-201ENST00000365026 316 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL031985.1-201ENST00000392713 418 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 RN7SKP16-201ENST00000410180 299 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 RNU6-603P-201ENST00000411403 107 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 PCNPP4-201ENST00000414817 517 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC38Q502W7 SRSF1P1-201ENST00000424058 520 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC009965.2-201ENST00000425328 970 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC104843.2-201ENST00000427666 297 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 GSTM5P1-201ENST00000434751 660 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL391987.1-201ENST00000441025 200 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AC092809.1-201ENST00000441469 474 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL161636.2-201ENST00000445179 927 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 AL358794.1-201ENST00000445689 381 ntBASIC5.44□□□□□ -1.54
CCDC38Q502W7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms