Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 VN1R81P-201ENST00000602085 372 ntBASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 Z98200.1-201ENST00000607298 470 ntBASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 AP000346.3-201ENST00000622821 210 ntBASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 AC073342.3-201ENST00000624211 193 ntBASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 AC120338.1-201ENST00000625074 1541 ntBASIC4.67□□□□□ -1.66
PTPN20Q4JDL3 AL137100.1-201ENST00000556703 1620 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 RNA5SP372-201ENST00000390836 115 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AL078604.1-201ENST00000404609 466 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 RPS20P14-201ENST00000412545 360 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 MTCO1P51-201ENST00000427672 1060 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC114495.1-201ENST00000441274 436 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 MTND4LP12-201ENST00000448237 295 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AK3P4-201ENST00000504283 583 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 RN7SKP92-201ENST00000517266 244 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC008536.1-201ENST00000602872 669 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC093765.1-201ENST00000603758 881 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC026979.4-201ENST00000606555 645 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AP005019.3-201ENST00000620418 560 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC107021.2-201ENST00000567714 2095 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 AC092435.4-201ENST00000623012 4159 ntBASIC4.66□□□□□ -1.66
PTPN20Q4JDL3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PTPN20Q4JDL3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.65□□□□□ -1.66
PTPN20Q4JDL3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PTPN20Q4JDL3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PTPN20Q4JDL3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTPN20Q4JDL3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTPN20Q4JDL3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC098592.2-201ENST00000413158 265 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 RPL26P29-201ENST00000415623 438 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 VN1R32P-201ENST00000452234 905 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AP002371.1-201ENST00000463604 433 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 HMGB1P19-201ENST00000517578 577 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC107918.3-201ENST00000533272 382 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC125612.1-201ENST00000547580 377 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC068831.4-201ENST00000556118 109 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC005034.4-201ENST00000603612 899 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AL137246.1-201ENST00000607072 977 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AL354950.1-201ENST00000614150 568 ntBASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN20Q4JDL3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 MAPK10-320ENST00000641462 6696 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 RNU6-1331P-201ENST00000363658 106 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 RNA5SP22-201ENST00000365393 109 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 CENPIP1-201ENST00000425713 902 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 AL450263.2-201ENST00000439400 589 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 OR52Y1P-201ENST00000452418 828 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 AC005008.1-201ENST00000456151 612 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 AC096741.1-201ENST00000472250 846 ntBASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.64□□□□□ -1.67
PTPN20Q4JDL3 AC021146.3-201ENST00000511911 260 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms