Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR6716-201ENST00000613413 80 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 Z95331.1-201ENST00000623075 23112 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AL512430.2-201ENST00000406786 339 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 RAD23BP1-201ENST00000421404 1227 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 CKS1BP6-201ENST00000424932 240 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 RPS29P17-201ENST00000430795 166 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC106806.2-201ENST00000509365 500 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 IGKV2D-10-201ENST00000520194 281 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC138701.1-201ENST00000524329 714 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AL109766.1-201ENST00000555080 552 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC011477.5-201ENST00000586571 259 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AP005019.3-201ENST00000620418 560 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 PHKBP1-201ENST00000450951 1951 ntBASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM1Q2M3G4 AL136164.3-201ENST00000624429 3978 ntBASIC5.34□□□□□ -1.56
SHROOM1Q2M3G4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.34□□□□□ -1.56
SHROOM1Q2M3G4 LINC01109-201ENST00000603837 3081 ntBASIC5.34□□□□□ -1.56
SHROOM1Q2M3G4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.56
SHROOM1Q2M3G4 AL034370.1-201ENST00000397254 1590 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL583835.1-201ENST00000399570 407 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AP000580.1-201ENST00000404439 358 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 SETP15-201ENST00000412724 337 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 TMBIM7P-201ENST00000418074 855 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 RPS12P10-201ENST00000427031 377 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 TDGF1P1-201ENST00000445734 527 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 RPL23AP43-201ENST00000446445 471 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL935212.3-201ENST00000450729 284 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 ISCUP1-201ENST00000454451 448 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC041039.1-201ENST00000485656 536 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC098799.3-201ENST00000506095 438 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC127024.5-201ENST00000580085 462 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AP001160.4-201ENST00000596971 382 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL109618.2-201ENST00000605527 211 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AL445567.2-201ENST00000618935 498 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 AC083843.3-201ENST00000623679 2186 ntBASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM1Q2M3G4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC026523.2-201ENST00000625039 7739 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AL672167.1-205ENST00000641112 3080 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC090971.4-201ENST00000560291 1800 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 MUC2-202ENST00000613187 4845 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AL121657.1-201ENST00000327215 531 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms