Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC087763.1-201ENST00000603391 286 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC008966.2-201ENST00000606157 453 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL035461.2-201ENST00000619201 524 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL442639.1-201ENST00000625030 1899 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 NCLP2-201ENST00000416078 1462 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HIST1H1AQ02539 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HIST1H1AQ02539 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 RNA5SP123-201ENST00000363244 119 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 RNU4-34P-201ENST00000410431 124 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 OR1H1P-201ENST00000448731 937 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 TRY2P-201ENST00000448860 689 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC079168.2-201ENST00000453977 416 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC090142.1-201ENST00000465776 462 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 S100A11P1-201ENST00000477525 312 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 SYT14P1-201ENST00000481459 721 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC004815.1-201ENST00000484185 331 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC006499.6-201ENST00000511169 607 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC018552.3-201ENST00000567416 561 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC015912.2-201ENST00000571053 181 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 MIR5699-201ENST00000578903 90 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC008759.1-201ENST00000589783 983 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 RPL7P50-201ENST00000600588 727 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AL645927.2-201ENST00000618350 349 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 MIR6886-201ENST00000619864 61 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 AP000756.2-201ENST00000624168 2567 ntBASIC3.52□□□□□ -1.85
HIST1H1AQ02539 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST1H1AQ02539 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AL355852.1-201ENST00000454081 1771 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC103591.2-201ENST00000265259 766 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AL590762.2-201ENST00000395798 571 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AL591848.1-201ENST00000413092 322 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 OR2B7P-201ENST00000429302 934 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 YWHAEP5-201ENST00000431545 765 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 MAPRE1P3-201ENST00000435438 796 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 SUMO2P1-206ENST00000445436 284 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AL035551.1-201ENST00000446931 348 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AL645939.1-201ENST00000453429 797 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AURKAPS2-201ENST00000454983 333 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 ATP5G1P3-201ENST00000463301 410 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 GAPDHP56-201ENST00000506031 988 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC098799.3-201ENST00000506095 438 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms