Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FKBP1BP1-201ENST00000553366 325 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 PSMB7P1-201ENST00000556349 514 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNA1P78396 VN1R85P-201ENST00000601587 426 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 AP000843.1-201ENST00000624880 701 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CCNA1P78396 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCNA1P78396 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCNA1P78396 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCNA1P78396 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNA1P78396 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCNA1P78396 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CCNA1P78396 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 ST13P16-201ENST00000401760 781 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 TMSB10P2-201ENST00000416049 131 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNA1P78396 AC009302.1-201ENST00000417147 390 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNA1P78396 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 RPL23AP93-201ENST00000440847 484 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 AC114755.5-201ENST00000447760 831 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 RN7SL98P-201ENST00000462271 300 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 RPL5P16-201ENST00000471467 790 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 AC026402.1-201ENST00000513642 170 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 RNA5SP230-201ENST00000517039 122 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 MRPL49P2-201ENST00000521066 465 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNA1P78396 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNA1P78396 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNA1P78396 AC127024.5-201ENST00000580085 462 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNA1P78396 AC024941.1-201ENST00000612250 334 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 ZYXP1-201ENST00000617638 118 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 AL445567.2-201ENST00000618935 498 ntBASIC5.26□□□□□ -1.57
CCNA1P78396 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNA1P78396 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNA1P78396 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNA1P78396 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CCNA1P78396 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNA1P78396 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 RNU6-697P-201ENST00000363348 107 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 RN7SKP224-201ENST00000364140 325 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCNA1P78396 RNU6-178P-201ENST00000384631 104 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 MIR659-201ENST00000384963 97 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.25□□□□□ -1.57
CCNA1P78396 MTND4LP13-201ENST00000425022 298 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 RPS12P10-201ENST00000427031 377 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNA1P78396 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.25□□□□□ -1.57
CCNA1P78396 PHBP16-201ENST00000446318 950 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.25□□□□□ -1.57
CCNA1P78396 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNA1P78396 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.25□□□□□ -1.57
CCNA1P78396 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNA1P78396 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 snoU109.6-201ENST00000516831 118 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNA1P78396 OR8G5-201ENST00000524943 1041 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.25□□□□□ -1.57
CCNA1P78396 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.25□□□□□ -1.57
CCNA1P78396 AC009852.2-201ENST00000567898 485 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 DPRXP4-201ENST00000578053 568 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNA1P78396 AC067959.1-201ENST00000604334 379 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AL109618.2-201ENST00000605527 211 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.25□□□□□ -1.57
CCNA1P78396 AC245389.2-201ENST00000616023 576 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AC242843.1-201ENST00000618702 573 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 AL031119.1-201ENST00000404707 1879 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCNA1P78396 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 AL450326.2-201ENST00000421913 1962 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNA1P78396 AC022893.2-201ENST00000564832 3296 ntBASIC5.25□□□□□ -1.57
CCNA1P78396 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms