Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SNORA68.2-201ENST00000391263 128 ntBASIC3.97□□□□□ -1.77
UBA52P62987 SNORA77-201ENST00000408716 125 ntBASIC3.97□□□□□ -1.77
UBA52P62987 RNA5SP39-201ENST00000411245 120 ntBASIC3.97□□□□□ -1.77
UBA52P62987 GTF2IP5-201ENST00000414608 731 ntBASIC3.97□□□□□ -1.77
UBA52P62987 BX510359.2-201ENST00000417920 305 ntBASIC3.97□□□□□ -1.77
UBA52P62987 VN1R37P-201ENST00000419096 748 ntBASIC3.97□□□□□ -1.77
UBA52P62987 LINC00993-201ENST00000420453 540 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 RPL10P17-201ENST00000453852 316 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AURKAPS2-201ENST00000454983 333 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.97□□□□□ -1.77
UBA52P62987 HMGB1P4-201ENST00000455362 567 ntBASIC3.97□□□□□ -1.77
UBA52P62987 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.97□□□□□ -1.77
UBA52P62987 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.97□□□□□ -1.77
UBA52P62987 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.97□□□□□ -1.77
UBA52P62987 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.97□□□□□ -1.77
UBA52P62987 RN7SKP92-201ENST00000517266 244 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AC090151.1-201ENST00000520784 730 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AC090281.1-201ENST00000523019 276 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 SOX5P1-201ENST00000524155 1127 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AL358913.1-201ENST00000554342 121 ntBASIC3.97□□□□□ -1.77
UBA52P62987 PARP1P2-201ENST00000556806 195 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.97□□□□□ -1.77
UBA52P62987 TVP23CP2-201ENST00000571473 623 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.97□□□□□ -1.77
UBA52P62987 HMGB2P1-201ENST00000591146 634 ntBASIC3.97□□□□□ -1.77
UBA52P62987 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 AC021106.3-201ENST00000623925 531 ntBASIC3.97□□□□□ -1.77
UBA52P62987 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
UBA52P62987 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBA52P62987 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBA52P62987 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.96□□□□□ -1.78
UBA52P62987 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 NRBF2P3-201ENST00000432731 865 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AL606490.8-201ENST00000441624 319 ntBASIC3.96□□□□□ -1.78
UBA52P62987 TXNP2-201ENST00000443918 295 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.96□□□□□ -1.78
UBA52P62987 AC234781.3-201ENST00000452540 973 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.96□□□□□ -1.78
UBA52P62987 AC026979.1-201ENST00000492525 396 ntBASIC3.96□□□□□ -1.78
UBA52P62987 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.96□□□□□ -1.78
UBA52P62987 AK3P4-201ENST00000504283 583 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 HNRNPKP5-201ENST00000515300 253 ntBASIC3.96□□□□□ -1.78
UBA52P62987 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.96□□□□□ -1.78
UBA52P62987 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.96□□□□□ -1.78
UBA52P62987 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.96□□□□□ -1.78
UBA52P62987 AC136624.4-201ENST00000573044 370 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 AL034374.2-201ENST00000605281 548 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AL353726.1-201ENST00000614041 1000 ntBASIC3.96□□□□□ -1.78
UBA52P62987 AC103858.2-201ENST00000621471 543 ntBASIC3.96□□□□□ -1.78
UBA52P62987 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
UBA52P62987 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBA52P62987 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBA52P62987 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBA52P62987 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.96□□□□□ -1.78
UBA52P62987 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBA52P62987 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBA52P62987 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
UBA52P62987 AC011266.1-201ENST00000624119 3569 ntBASIC3.95□□□□□ -1.78
UBA52P62987 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBA52P62987 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.95□□□□□ -1.78
UBA52P62987 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBA52P62987 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.95□□□□□ -1.78
UBA52P62987 AC068538.1-201ENST00000376856 336 ntBASIC3.95□□□□□ -1.78
UBA52P62987 SNORA70.10-201ENST00000384515 134 ntBASIC3.95□□□□□ -1.78
UBA52P62987 RPL23AP48-201ENST00000406913 488 ntBASIC3.95□□□□□ -1.78
UBA52P62987 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.95□□□□□ -1.78
UBA52P62987 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.95□□□□□ -1.78
UBA52P62987 CENPIP1-201ENST00000425713 902 ntBASIC3.95□□□□□ -1.78
UBA52P62987 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.95□□□□□ -1.78
UBA52P62987 RPS29P9-201ENST00000440360 171 ntBASIC3.95□□□□□ -1.78
UBA52P62987 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.95□□□□□ -1.78
UBA52P62987 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.95□□□□□ -1.78
UBA52P62987 GEMIN8P3-201ENST00000445417 720 ntBASIC3.95□□□□□ -1.78
UBA52P62987 AC010733.1-201ENST00000451515 401 ntBASIC3.95□□□□□ -1.78
UBA52P62987 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.95□□□□□ -1.78
UBA52P62987 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.95□□□□□ -1.78
UBA52P62987 STRADBP1-201ENST00000478954 1281 ntBASIC3.95□□□□□ -1.78
UBA52P62987 AC116562.1-201ENST00000485355 781 ntBASIC3.95□□□□□ -1.78
UBA52P62987 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms