Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 AC100793.4-201ENST00000613683 429 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 MIR7973-1-201ENST00000614683 76 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC116165.2-201ENST00000616705 206 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC023509.5-201ENST00000617434 807 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 AL591926.1-201ENST00000620542 217 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC092192.1-201ENST00000633154 1018 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC099063.3-201ENST00000642066 185 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 AL442128.2-201ENST00000620246 1824 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 CASC19-284ENST00000642142 1868 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.21□□□□□ -1.57
CLRN1P58418 AC011447.7-201ENST00000624228 1590 ntBASIC5.21□□□□□ -1.57
CLRN1P58418 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CLRN1P58418 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 AC096656.1-201ENST00000623826 1364 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLRN1P58418 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLRN1P58418 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.21□□□□□ -1.58
CLRN1P58418 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 CRIP1P1-201ENST00000427567 185 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 RPL31P54-201ENST00000429803 370 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC096775.1-201ENST00000437724 448 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.21□□□□□ -1.58
CLRN1P58418 AC092641.1-201ENST00000440229 772 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 RPS7P5-201ENST00000441482 581 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 TRIM60P18-201ENST00000441518 828 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 IGBP1P3-201ENST00000447449 1000 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AL034418.1-201ENST00000448675 860 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 MTCYBP1-201ENST00000454315 1119 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 CFTRP1-201ENST00000456646 183 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC006539.1-201ENST00000481419 501 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
CLRN1P58418 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.21□□□□□ -1.58
CLRN1P58418 SCARNA18.1-201ENST00000516330 83 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 AC105233.3-201ENST00000531125 744 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.21□□□□□ -1.58
CLRN1P58418 AL121594.2-201ENST00000541658 472 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.21□□□□□ -1.58
CLRN1P58418 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 AC090312.2-201ENST00000582687 378 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC107982.3-201ENST00000584957 985 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 AL513327.3-201ENST00000602618 469 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AC239868.4-201ENST00000608318 671 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 MIR7109-201ENST00000613748 65 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLRN1P58418 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLRN1P58418 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLRN1P58418 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 LYARP1-201ENST00000436977 1501 ntBASIC5.21□□□□□ -1.58
CLRN1P58418 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.21□□□□□ -1.58
CLRN1P58418 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.21□□□□□ -1.58
CLRN1P58418 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLRN1P58418 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.21□□□□□ -1.58
CLRN1P58418 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 OR52E6-202ENST00000379946 954 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 RNU6-1119P-201ENST00000384349 108 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 RNU6-729P-201ENST00000384399 107 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 MIR137-201ENST00000385223 102 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms