Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CASC19-284ENST00000642142 1868 ntBASIC4.68□□□□□ -1.66
CLDN20P56880 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CLDN20P56880 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN20P56880 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN20P56880 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN20P56880 AC023421.1-201ENST00000590535 1785 ntBASIC4.68□□□□□ -1.66
CLDN20P56880 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN20P56880 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN20P56880 AC133552.1-201ENST00000569988 4007 ntBASIC4.68□□□□□ -1.66
CLDN20P56880 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN20P56880 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 VN2R3P-201ENST00000422626 1412 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 SNORA70-201ENST00000384436 135 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 MIR765-201ENST00000390226 114 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLDN20P56880 NUDT19P3-201ENST00000404698 555 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 ZNF602P-201ENST00000405929 924 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 VTA1P1-201ENST00000414044 866 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN20P56880 USP12PY-201ENST00000427677 1064 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.67□□□□□ -1.66
CLDN20P56880 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN20P56880 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN20P56880 AL353093.1-201ENST00000441292 436 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 RPL7P61-201ENST00000451721 751 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 OFD1P3Y-201ENST00000453312 783 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC096741.1-201ENST00000472250 846 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC090114.3-201ENST00000479267 829 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 RN7SL814P-201ENST00000487715 300 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 OR5AK3P-201ENST00000527486 1297 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 MTND1P24-201ENST00000552175 861 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC044860.2-201ENST00000561005 179 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 MIR4789-201ENST00000577469 82 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC007448.1-201ENST00000582714 234 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC006116.3-201ENST00000592968 361 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.67□□□□□ -1.66
CLDN20P56880 AC008147.4-201ENST00000617570 1204 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 AC073569.3-201ENST00000619055 682 ntBASIC4.67□□□□□ -1.66
CLDN20P56880 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
CLDN20P56880 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN20P56880 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CLDN20P56880 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CLDN20P56880 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN20P56880 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN20P56880 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLDN20P56880 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLDN20P56880 RNU5B-1-201ENST00000363286 116 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 RNA5SP27-201ENST00000363839 119 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN20P56880 RN7SKP213-201ENST00000410746 298 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 RPL23AP27-201ENST00000415161 451 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 AL161722.2-201ENST00000434731 981 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.66□□□□□ -1.66
CLDN20P56880 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN20P56880 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN20P56880 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms