Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN12P56749 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CLDN12P56749 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN12P56749 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN12P56749 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
CLDN12P56749 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN12P56749 MIR365B-201ENST00000362317 111 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 Y_RNA.62-201ENST00000362840 99 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 RNU6-171P-201ENST00000384354 107 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 RNU6-146P-201ENST00000384602 108 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 HSPD1P16-201ENST00000402302 394 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN12P56749 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
CLDN12P56749 RNA5SP104-201ENST00000410989 118 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN12P56749 OR6K4P-201ENST00000423179 955 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 IPMKP1-201ENST00000425988 855 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 RPL23AP2-201ENST00000471227 466 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC104763.1-201ENST00000475274 360 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC117394.1-201ENST00000477323 567 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 RN7SL30P-201ENST00000488416 306 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC025445.1-201ENST00000502728 300 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 GAPDHP56-201ENST00000506031 988 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN12P56749 BTF3P13-201ENST00000513224 490 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 IFITM8P-201ENST00000522529 394 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN12P56749 AC022832.1-201ENST00000530718 645 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 NPM1P35-201ENST00000533043 868 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC069240.1-201ENST00000548774 375 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN12P56749 HMGB3P26-201ENST00000560051 582 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 CYP4A43P-201ENST00000568156 121 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN12P56749 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN12P56749 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN12P56749 SNX6P1-201ENST00000601728 1224 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC010200.2-201ENST00000605098 235 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 GMCL1P2-201ENST00000605230 823 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 Z98200.1-201ENST00000607298 470 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AP000864.1-201ENST00000609424 650 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 AC026368.1-201ENST00000614934 690 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN12P56749 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN12P56749 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN12P56749 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 AC233968.1-201ENST00000611212 1300 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 AC009951.1-201ENST00000623674 2614 ntBASIC3.89□□□□□ -1.79
CLDN12P56749 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN12P56749 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
CLDN12P56749 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN12P56749 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN12P56749 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
CLDN12P56749 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN12P56749 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC114546.3-201ENST00000623582 1734 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 RNA5SP191-201ENST00000362585 102 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 RNU4-4P-201ENST00000364588 130 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 RNU6-225P-201ENST00000384613 103 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN12P56749 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN12P56749 RSU1P3-201ENST00000412878 835 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC140479.3-201ENST00000418944 1126 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC062016.2-201ENST00000420950 676 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC079807.1-201ENST00000429993 481 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 RPEP2-201ENST00000432149 701 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC144530.1-201ENST00000452862 555 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN12P56749 DDX39BP2-208ENST00000453923 258 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC069277.2-201ENST00000454211 432 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC104109.1-201ENST00000498563 436 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 SCARNA22-201ENST00000503991 125 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN12P56749 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC013701.1-201ENST00000522657 465 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC090819.1-201ENST00000523800 1111 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.88□□□□□ -1.79
CLDN12P56749 AC084757.1-201ENST00000559987 490 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 AC090515.3-201ENST00000560431 315 ntBASIC3.88□□□□□ -1.79
CLDN12P56749 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
CLDN12P56749 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms