Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL591363.1-201ENST00000450091 483 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AC105137.1-201ENST00000484355 562 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 PPM1AP1-201ENST00000502740 1135 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN6P56747 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN6P56747 AL135786.2-201ENST00000608422 615 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN6P56747 RNA5SP196-201ENST00000625967 102 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 PCAT14-202ENST00000627127 3935 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN6P56747 AL672167.1-204ENST00000641875 3017 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN6P56747 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN6P56747 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN6P56747 SNRPFP1-201ENST00000414761 252 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN6P56747 RPL36AP36-201ENST00000418616 301 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 RPL7P57-201ENST00000423238 740 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 RPS12P10-201ENST00000427031 377 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 YY1P1-201ENST00000427625 668 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 NDUFA5P1-201ENST00000433858 341 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 RPL23AP93-201ENST00000440847 484 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 H2AFZP5-201ENST00000446960 382 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 MTND4LP12-201ENST00000448237 295 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 AC093166.2-201ENST00000455969 1017 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 HSPE1P22-201ENST00000456856 327 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN6P56747 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN6P56747 SAP18P1-201ENST00000512058 390 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN6P56747 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN6P56747 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 IPO5P1-202ENST00000600039 287 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 AL591034.3-201ENST00000605511 685 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 AC091979.2-201ENST00000607514 214 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 AC009951.1-201ENST00000623674 2614 ntBASIC4.45□□□□□ -1.7
CLDN6P56747 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN6P56747 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLDN6P56747 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN6P56747 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 AC011447.7-201ENST00000624228 1590 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLDN6P56747 AC233289.1-201ENST00000403700 508 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC011933.1-201ENST00000413334 321 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN6P56747 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN6P56747 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN6P56747 PHBP16-201ENST00000446318 950 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC114755.5-201ENST00000447760 831 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 BTF3P6-201ENST00000448054 499 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN6P56747 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 TPT1P1-201ENST00000458495 518 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 RNA5SP103-201ENST00000459503 118 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC116533.1-201ENST00000459748 321 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN6P56747 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 AC023632.4-201ENST00000517783 191 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN6P56747 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN6P56747 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.44□□□□□ -1.7
CLDN6P56747 AGGF1P9-201ENST00000561884 913 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC116553.2-201ENST00000564203 463 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN6P56747 AC124856.1-201ENST00000600819 896 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN6P56747 BNIP3P41-202ENST00000616656 861 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN6P56747 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN6P56747 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLDN6P56747 AL022393.1-201ENST00000625142 1677 ntBASIC4.44□□□□□ -1.7
CLDN6P56747 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms