Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC026741.1-201ENST00000605892 482 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AP000864.1-201ENST00000609424 650 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC245100.7-201ENST00000609678 442 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AL627230.1-201ENST00000613077 211 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC008759.3-201ENST00000613300 508 ntBASIC4.79□□□□□ -1.64
CDH13P55290 RMST_10.1-201ENST00000616309 154 ntBASIC4.79□□□□□ -1.64
CDH13P55290 MIR8069-1-201ENST00000616627 86 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AL591926.8-201ENST00000616876 211 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AC008115.4-201ENST00000619780 775 ntBASIC4.79□□□□□ -1.64
CDH13P55290 AL445528.2-201ENST00000620582 470 ntBASIC4.79□□□□□ -1.64
CDH13P55290 MIR8069-2-201ENST00000621412 86 ntBASIC4.79□□□□□ -1.64
CDH13P55290 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH13P55290 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH13P55290 AL445437.1-201ENST00000623157 3087 ntBASIC4.79□□□□□ -1.64
CDH13P55290 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH13P55290 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH13P55290 CASC19-206ENST00000641028 1430 ntBASIC4.79□□□□□ -1.64
CDH13P55290 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH13P55290 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH13P55290 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH13P55290 SNURFL-201ENST00000309296 343 ntBASIC4.78□□□□□ -1.64
CDH13P55290 OR4K17-201ENST00000315543 1032 ntBASIC4.78□□□□□ -1.64
CDH13P55290 RNU6-304P-201ENST00000364855 107 ntBASIC4.78□□□□□ -1.64
CDH13P55290 RNA5SP455-201ENST00000365190 119 ntBASIC4.78□□□□□ -1.64
CDH13P55290 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH13P55290 MIR1286-201ENST00000408112 78 ntBASIC4.78□□□□□ -1.64
CDH13P55290 RN7SKP125-201ENST00000410481 302 ntBASIC4.78□□□□□ -1.64
CDH13P55290 BMS1P13-201ENST00000417301 885 ntBASIC4.78□□□□□ -1.64
CDH13P55290 EIF4A1P1-201ENST00000420241 934 ntBASIC4.78□□□□□ -1.64
CDH13P55290 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH13P55290 MED6P1-201ENST00000439659 713 ntBASIC4.78□□□□□ -1.64
CDH13P55290 OR7E125P-201ENST00000443450 846 ntBASIC4.78□□□□□ -1.64
CDH13P55290 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH13P55290 AL354710.1-201ENST00000453641 246 ntBASIC4.78□□□□□ -1.64
CDH13P55290 RPS18P6-201ENST00000476880 458 ntBASIC4.78□□□□□ -1.64
CDH13P55290 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 COX6B1P5-201ENST00000509843 249 ntBASIC4.78□□□□□ -1.64
CDH13P55290 ATP5LP3-201ENST00000514223 304 ntBASIC4.78□□□□□ -1.64
CDH13P55290 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 AP002812.4-201ENST00000532139 286 ntBASIC4.78□□□□□ -1.64
CDH13P55290 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH13P55290 AC019206.1-201ENST00000621938 425 ntBASIC4.78□□□□□ -1.64
CDH13P55290 AP001005.3-201ENST00000622049 129 ntBASIC4.78□□□□□ -1.64
CDH13P55290 MIR4302-201ENST00000638058 60 ntBASIC4.78□□□□□ -1.64
CDH13P55290 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CDH13P55290 MTCO1P18-201ENST00000455518 1419 ntBASIC4.78□□□□□ -1.64
CDH13P55290 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH13P55290 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH13P55290 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH13P55290 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH13P55290 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH13P55290 AC017007.4-201ENST00000503353 1352 ntBASIC4.78□□□□□ -1.64
CDH13P55290 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH13P55290 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH13P55290 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 VTA1P1-201ENST00000414044 866 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AF186996.5-201ENST00000418098 904 ntBASIC4.77□□□□□ -1.65
CDH13P55290 DDX39BP1-205ENST00000422507 192 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC073310.1-201ENST00000423226 1033 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC093422.3-201ENST00000428506 305 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH13P55290 NPM1P33-201ENST00000438918 872 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AL163193.1-201ENST00000444895 788 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AL589765.3-201ENST00000446084 462 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC099063.2-201ENST00000446360 662 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AL096829.2-201ENST00000446582 742 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AC005229.2-201ENST00000456995 399 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 RNU6-1218P-201ENST00000458990 108 ntBASIC4.77□□□□□ -1.65
CDH13P55290 METTL15P1-201ENST00000481421 1045 ntBASIC4.77□□□□□ -1.65
CDH13P55290 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH13P55290 SNRPCP2-201ENST00000504370 475 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC073358.1-201ENST00000505671 684 ntBASIC4.77□□□□□ -1.65
CDH13P55290 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH13P55290 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH13P55290 OR5AK3P-201ENST00000527486 1297 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH13P55290 AC068339.2-201ENST00000534395 618 ntBASIC4.77□□□□□ -1.65
CDH13P55290 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH13P55290 ZNF92P3-201ENST00000596594 954 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms