Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 AC079097.1-201ENST00000512187 1399 ntBASIC5.52□□□□□ -1.53
COPAP53621 AC093535.2-201ENST00000624769 2326 ntBASIC5.52□□□□□ -1.53
COPAP53621 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.52□□□□□ -1.53
COPAP53621 AC073055.1-201ENST00000456901 1621 ntBASIC5.52□□□□□ -1.53
COPAP53621 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 AL445437.1-201ENST00000623157 3087 ntBASIC5.51□□□□□ -1.53
COPAP53621 AL360270.2-201ENST00000562952 5985 ntBASIC5.51□□□□□ -1.53
COPAP53621 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.51□□□□□ -1.53
COPAP53621 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 AC104118.1-201ENST00000607625 1589 ntBASIC5.51□□□□□ -1.53
COPAP53621 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 SNORA62.2-201ENST00000364672 152 ntBASIC5.51□□□□□ -1.53
COPAP53621 SNORA67-201ENST00000384423 137 ntBASIC5.51□□□□□ -1.53
COPAP53621 RNU6-906P-201ENST00000384700 70 ntBASIC5.51□□□□□ -1.53
COPAP53621 MIR765-201ENST00000390226 114 ntBASIC5.51□□□□□ -1.53
COPAP53621 Y_RNA.578-201ENST00000390903 88 ntBASIC5.51□□□□□ -1.53
COPAP53621 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.51□□□□□ -1.53
COPAP53621 MTND2P16-201ENST00000419987 799 ntBASIC5.51□□□□□ -1.53
COPAP53621 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.51□□□□□ -1.53
COPAP53621 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.51□□□□□ -1.53
COPAP53621 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.51□□□□□ -1.53
COPAP53621 FAM96AP1-201ENST00000430879 482 ntBASIC5.51□□□□□ -1.53
COPAP53621 GTF2IP3-201ENST00000433887 494 ntBASIC5.51□□□□□ -1.53
COPAP53621 RPL7P29-201ENST00000437151 728 ntBASIC5.51□□□□□ -1.53
COPAP53621 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.51□□□□□ -1.53
COPAP53621 AL450263.2-201ENST00000439400 589 ntBASIC5.51□□□□□ -1.53
COPAP53621 AL592437.1-201ENST00000443781 492 ntBASIC5.51□□□□□ -1.53
COPAP53621 ARL5AP2-201ENST00000444698 533 ntBASIC5.51□□□□□ -1.53
COPAP53621 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
COPAP53621 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 MTCO2P6-201ENST00000463134 685 ntBASIC5.51□□□□□ -1.53
COPAP53621 RPSAP50-201ENST00000481955 852 ntBASIC5.51□□□□□ -1.53
COPAP53621 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 AC010627.1-201ENST00000503819 1294 ntBASIC5.51□□□□□ -1.53
COPAP53621 HMGB1P44-201ENST00000508597 572 ntBASIC5.51□□□□□ -1.53
COPAP53621 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.51□□□□□ -1.53
COPAP53621 RNU6-941P-201ENST00000516346 108 ntBASIC5.51□□□□□ -1.53
COPAP53621 HMGB1P40-201ENST00000525121 540 ntBASIC5.51□□□□□ -1.53
COPAP53621 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 AC022832.1-201ENST00000530718 645 ntBASIC5.51□□□□□ -1.53
COPAP53621 AC122688.1-201ENST00000541494 223 ntBASIC5.51□□□□□ -1.53
COPAP53621 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.51□□□□□ -1.53
COPAP53621 NMNAT1P5-201ENST00000559657 841 ntBASIC5.51□□□□□ -1.53
COPAP53621 AC095057.3-201ENST00000567102 1157 ntBASIC5.51□□□□□ -1.53
COPAP53621 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.51□□□□□ -1.53
COPAP53621 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.51□□□□□ -1.53
COPAP53621 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 AC125494.3-201ENST00000602759 455 ntBASIC5.51□□□□□ -1.53
COPAP53621 AC013468.1-201ENST00000608680 598 ntBASIC5.51□□□□□ -1.53
COPAP53621 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.51□□□□□ -1.53
COPAP53621 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 AC068870.2-201ENST00000620635 389 ntBASIC5.51□□□□□ -1.53
COPAP53621 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COPAP53621 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.51□□□□□ -1.53
COPAP53621 AC011493.1-201ENST00000596753 1632 ntBASIC5.51□□□□□ -1.53
COPAP53621 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPAP53621 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COPAP53621 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
COPAP53621 AL133268.1-201ENST00000405676 1401 ntBASIC5.5□□□□□ -1.53
COPAP53621 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COPAP53621 PHKBP1-201ENST00000450951 1951 ntBASIC5.5□□□□□ -1.53
COPAP53621 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 ENSAP3-201ENST00000312710 333 ntBASIC5.5□□□□□ -1.53
COPAP53621 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COPAP53621 RN7SKP213-201ENST00000410746 298 ntBASIC5.5□□□□□ -1.53
COPAP53621 RPSAP35-201ENST00000413753 818 ntBASIC5.5□□□□□ -1.53
COPAP53621 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.5□□□□□ -1.53
COPAP53621 RPL6P29-201ENST00000414863 865 ntBASIC5.5□□□□□ -1.53
COPAP53621 OR6C64P-201ENST00000419708 825 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC099336.2-201ENST00000422457 254 ntBASIC5.5□□□□□ -1.53
COPAP53621 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.5□□□□□ -1.53
COPAP53621 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 VN1R25P-201ENST00000443385 738 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC099560.2-201ENST00000457554 255 ntBASIC5.5□□□□□ -1.53
COPAP53621 RPL7AP6-201ENST00000477943 801 ntBASIC5.5□□□□□ -1.53
COPAP53621 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.5□□□□□ -1.53
COPAP53621 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.5□□□□□ -1.53
COPAP53621 AC021193.1-201ENST00000511607 420 ntBASIC5.5□□□□□ -1.53
COPAP53621 MTND6P2-201ENST00000512226 524 ntBASIC5.5□□□□□ -1.53
COPAP53621 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.5□□□□□ -1.53
COPAP53621 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.5□□□□□ -1.53
COPAP53621 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms