Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCLP35914 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCLP35914 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGCLP35914 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 AC108467.2-201ENST00000617640 1597 ntBASIC4.6□□□□□ -1.67
HMGCLP35914 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCLP35914 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCLP35914 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGCLP35914 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 AL672167.1-205ENST00000641112 3080 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCLP35914 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMGCLP35914 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 AC021146.4-201ENST00000309229 279 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
HMGCLP35914 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCLP35914 SNORD113.2-201ENST00000364166 89 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCLP35914 MT-RNR1-201ENST00000389680 954 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCLP35914 Z80107.2-201ENST00000445127 392 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC073587.1-201ENST00000447093 876 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCLP35914 EIF2S2P5-201ENST00000457635 968 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCLP35914 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.59□□□□□ -1.67
HMGCLP35914 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 AC134698.5-201ENST00000519444 336 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 MTND2P7-201ENST00000521337 640 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 AP006289.1-201ENST00000538089 277 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC125612.1-201ENST00000547580 377 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCLP35914 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCLP35914 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCLP35914 DHX40P1-201ENST00000588725 1412 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCLP35914 HMGB2P1-201ENST00000591146 634 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 BNIP3P32-201ENST00000600015 554 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC023762.1-201ENST00000603280 584 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC015802.5-201ENST00000607478 399 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 LINC00901.1-201ENST00000617252 152 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AC234782.5-201ENST00000617723 324 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 AL590410.1-201ENST00000617925 333 ntBASIC4.59□□□□□ -1.67
HMGCLP35914 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HMGCLP35914 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMGCLP35914 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.59□□□□□ -1.68
HMGCLP35914 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMGCLP35914 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
HMGCLP35914 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HMGCLP35914 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGCLP35914 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCLP35914 HSPA8P17-201ENST00000427029 1382 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 LINC01355-201ENST00000566551 5444 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 OR4K15-201ENST00000305051 1216 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HMGCLP35914 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 OR1F12-201ENST00000402365 945 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 MTND3P20-201ENST00000407663 186 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 EIF4A1P3-201ENST00000411521 244 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCLP35914 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 VN1R31P-201ENST00000417498 730 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 MTCO1P57-201ENST00000432182 261 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCLP35914 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 AL162591.2-201ENST00000449634 317 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 CEACAMP6-201ENST00000452007 574 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms