Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC004938.1-201ENST00000438468 308 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 MRPL48P1-201ENST00000445390 636 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 RPL7P32-201ENST00000457119 744 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AC053481.1-201ENST00000467217 306 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA9P31269 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA9P31269 RN7SKP34-201ENST00000516142 244 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 RNA5SP303-201ENST00000516192 130 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA9P31269 AC107918.3-201ENST00000533272 382 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA9P31269 AC007066.2-202ENST00000566531 914 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXA9P31269 AP002967.1-201ENST00000624203 539 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AC006065.6-201ENST00000625201 545 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 OR51H2P-202ENST00000641424 3046 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HOXA9P31269 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXA9P31269 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA9P31269 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
HOXA9P31269 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXA9P31269 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 AL359922.3-201ENST00000624779 1670 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HOXA9P31269 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA9P31269 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 AC008549.2-201ENST00000333482 706 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 RNA5SP366-201ENST00000365454 123 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AL445487.1-201ENST00000415694 1580 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 RPL36AP10-201ENST00000421785 322 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 EIF4HP2-201ENST00000424380 563 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AC012519.1-201ENST00000424588 610 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC092447.2-201ENST00000435487 669 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AL935212.3-201ENST00000450729 284 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AL591473.1-201ENST00000464297 313 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC007537.2-201ENST00000472093 511 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC091167.1-201ENST00000492017 396 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA9P31269 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC138938.1-201ENST00000515431 782 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXA9P31269 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC093591.2-201ENST00000565254 3843 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA9P31269 AC011477.5-201ENST00000586571 259 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA9P31269 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 IPO5P1-202ENST00000600039 287 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 AP000843.1-201ENST00000624880 701 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 LINC01808-202ENST00000641680 1116 ntBASIC4.76□□□□□ -1.65
HOXA9P31269 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA9P31269 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA9P31269 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA9P31269 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HOXA9P31269 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXA9P31269 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 AC104118.1-201ENST00000607625 1589 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 VN2R3P-201ENST00000422626 1412 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXA9P31269 CPHL1P-201ENST00000461341 3407 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 RPS26P8-201ENST00000393490 348 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 AL512430.2-201ENST00000406786 339 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 RN7SKP97-201ENST00000410966 333 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 SMC4P1-201ENST00000414479 527 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXA9P31269 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXA9P31269 FTH1P16-201ENST00000435241 552 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXA9P31269 PHBP16-201ENST00000446318 950 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 NUTF2P3-201ENST00000448540 384 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 RPS6P2-201ENST00000454208 705 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 RPL7AP28-201ENST00000464513 571 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 UQCRHP4-201ENST00000471686 272 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 RPL21P6-201ENST00000479171 504 ntBASIC4.75□□□□□ -1.65
HOXA9P31269 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms