Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 MTCO1P14-201ENST00000441695 1559 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 PPIAP24-201ENST00000328558 471 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 RNA5SP140-201ENST00000364524 92 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 RNU6-532P-201ENST00000384318 107 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 Y_RNA.481-201ENST00000384373 102 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 PEX12P1-201ENST00000400284 1048 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AL023284.3-201ENST00000407767 334 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 AL359092.1-201ENST00000417156 265 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 BOLA3P4-201ENST00000418151 400 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 RPL36P18-201ENST00000419316 318 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 NIPA2P1-201ENST00000426223 976 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 UBBP5-201ENST00000446970 266 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 RPL31P15-201ENST00000449770 338 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 SLC31A1P1-201ENST00000451221 567 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 H3F3AP3-201ENST00000497682 407 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 IGBP1P4-201ENST00000503202 879 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NFKB1P19838 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.67□□□□□ -1.34
NFKB1P19838 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC005519.1-201ENST00000554490 601 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.67□□□□□ -1.34
NFKB1P19838 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC037471.2-201ENST00000564941 598 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 RPL29P33-201ENST00000587474 316 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.67□□□□□ -1.34
NFKB1P19838 BNIP3P23-201ENST00000599655 511 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AC090948.2-201ENST00000607363 564 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 MIR6849-201ENST00000618543 69 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AP001264.1-201ENST00000620602 703 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 AL683826.1-201ENST00000624104 627 ntBASIC6.67□□□□□ -1.34
NFKB1P19838 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.67□□□□□ -1.34
NFKB1P19838 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NFKB1P19838 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
NFKB1P19838 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NFKB1P19838 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.66□□□□□ -1.34
NFKB1P19838 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.66□□□□□ -1.34
NFKB1P19838 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 Y_RNA.25-201ENST00000362528 102 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 U8.3-201ENST00000363321 132 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 Y_RNA.138-201ENST00000363462 102 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 RNY3P3-201ENST00000363816 102 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 RN7SKP118-201ENST00000364331 330 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 AC092634.1-201ENST00000366505 199 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 U3.52-201ENST00000384034 216 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 SNORD116-23-201ENST00000384645 92 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 RN7SKP205-201ENST00000410999 307 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.66□□□□□ -1.34
NFKB1P19838 AC006509.1-201ENST00000420788 634 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.66□□□□□ -1.34
NFKB1P19838 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.66□□□□□ -1.34
NFKB1P19838 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
NFKB1P19838 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.66□□□□□ -1.34
NFKB1P19838 RPSAP24-201ENST00000461543 873 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.66□□□□□ -1.34
NFKB1P19838 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NFKB1P19838 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.66□□□□□ -1.34
NFKB1P19838 AC009567.2-201ENST00000502989 349 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 AC138409.2-202ENST00000507274 458 ntBASIC6.66□□□□□ -1.34
NFKB1P19838 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.66□□□□□ -1.34
NFKB1P19838 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.66□□□□□ -1.34
NFKB1P19838 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.66□□□□□ -1.34
NFKB1P19838 SCARNA5-201ENST00000516201 276 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms