Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC007559.1-201ENST00000428736 355 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC093414.1-201ENST00000434712 514 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 GSTA7P-201ENST00000438425 448 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL358794.1-201ENST00000445689 381 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 RN7SL441P-201ENST00000492388 296 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC118282.2-201ENST00000508739 374 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 OR7H2P-201ENST00000513483 306 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC012339.2-201ENST00000523996 453 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AP003033.1-201ENST00000527244 415 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC137768.1-201ENST00000549998 553 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL512310.9-201ENST00000553311 948 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 MTCYBP33-201ENST00000575007 1130 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC092106.3-201ENST00000611308 722 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL161616.1-201ENST00000611867 286 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC026585.1-201ENST00000619582 524 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 AC099786.3-201ENST00000565735 1410 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AL022322.2-201ENST00000624072 20397 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 NLRP3P1-201ENST00000622303 1785 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 RAD1P1-201ENST00000231383 813 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC017079.1-201ENST00000333650 415 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 GSTA12P-201ENST00000402398 508 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 HIGD1AP4-201ENST00000430194 280 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 ARF4P4-201ENST00000439608 520 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 SLC25A18P1-201ENST00000449385 454 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 RBMY2TP-201ENST00000451162 947 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DOAP06340 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DOAP06340 OR4A2P-201ENST00000527276 913 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 CYB5AP5-201ENST00000549779 389 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC009094.1-201ENST00000564443 426 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC010735.1-201ENST00000567305 1026 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC019322.1-201ENST00000571869 389 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC022884.2-201ENST00000578535 580 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 MIR4330-201ENST00000579077 105 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC091042.1-201ENST00000579213 173 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC025588.2-201ENST00000604851 466 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC005021.1-201ENST00000608730 355 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AL592494.3-201ENST00000609485 464 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AL138960.1-201ENST00000613838 513 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC019206.1-201ENST00000621938 425 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 MIR3974-201ENST00000637126 96 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
HLA-DOAP06340 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.91□□□□□ -1.46
HLA-DOAP06340 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DOAP06340 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DOAP06340 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DOAP06340 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DOAP06340 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DOAP06340 ECM1P2-201ENST00000503354 1577 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms