Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC073335.1-201ENST00000427776 363 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 RPS3AP54-201ENST00000435535 734 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 RPL7P33-201ENST00000444159 742 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 Z95152.1-201ENST00000453556 656 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 RPL7P32-201ENST00000457119 744 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 PSMC1P13-201ENST00000458195 985 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 ARL4AP1-201ENST00000503220 705 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 AC019278.1-201ENST00000623516 479 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 EIF2AP4-201ENST00000424793 1781 ntBASIC4.39□□□□□ -1.71
HLA-DQB2P05538 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQB2P05538 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC083843.3-201ENST00000623679 2186 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 NRBF2P2-201ENST00000413087 861 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 MFSD13B-201ENST00000420133 1290 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 RPL12P34-201ENST00000424532 479 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 DNAJC19P7-201ENST00000428811 344 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 RPS29P17-201ENST00000430795 166 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC079804.1-201ENST00000461922 436 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC011276.1-201ENST00000469688 323 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 PHBP17-201ENST00000528576 541 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC090515.3-201ENST00000560431 315 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AL356218.2-201ENST00000605264 187 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AC025175.1-201ENST00000606482 759 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AL445363.3-201ENST00000623080 671 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AP003497.2-201ENST00000624220 967 ntBASIC4.38□□□□□ -1.71
HLA-DQB2P05538 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQB2P05538 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 MTCO1P15-201ENST00000529569 1526 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 RNU1-32P-201ENST00000363937 159 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 SNORA56-201ENST00000383966 129 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AL050305.1-201ENST00000399993 1230 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 RN7SKP216-201ENST00000411050 312 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AL356968.2-201ENST00000412769 1257 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 RPA2P2-201ENST00000419698 796 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC009480.2-201ENST00000422916 432 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 PRELID3BP10-201ENST00000431957 584 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 CEACAMP1-201ENST00000434624 1035 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 CBX1P1-201ENST00000440184 427 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC104164.2-201ENST00000496953 495 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC010374.1-201ENST00000503762 1237 ntBASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DQB2P05538 AL109766.1-201ENST00000555080 552 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms