Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 RN7SKP156-201ENST00000410308 342 ntBASIC2.63□□□□□ -1.99
APOBP04114 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 AC006994.1-201ENST00000438212 839 ntBASIC2.63□□□□□ -1.99
APOBP04114 AP000563.1-201ENST00000490865 758 ntBASIC2.63□□□□□ -1.99
APOBP04114 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 MAPK10-328ENST00000641553 4009 ntBASIC2.62□□□□□ -1.99
APOBP04114 AP000432.2-201ENST00000624164 2048 ntBASIC2.62□□□□□ -1.99
APOBP04114 CASC19-206ENST00000641028 1430 ntBASIC2.62□□□□□ -1.99
APOBP04114 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 EOGT-210ENST00000615922 1931 ntBASIC2.62□□□□□ -1.99
APOBP04114 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 VN1R51P-201ENST00000411675 945 ntBASIC2.62□□□□□ -1.99
APOBP04114 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.62□□□□□ -1.99
APOBP04114 RPL7P9-201ENST00000468715 747 ntBASIC2.62□□□□□ -1.99
APOBP04114 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 KRT19P6-201ENST00000510983 209 ntBASIC2.62□□□□□ -1.99
APOBP04114 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 IGKV2D-19-201ENST00000523346 262 ntBASIC2.62□□□□□ -1.99
APOBP04114 AC110743.1-201ENST00000584870 478 ntBASIC2.62□□□□□ -1.99
APOBP04114 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.62□□□□□ -1.99
APOBP04114 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 RNA5SP513-201ENST00000364648 118 ntBASIC2.62□□□□□ -1.99
APOBP04114 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC2.62□□□□□ -1.99
APOBP04114 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.62□□□□□ -1.99
APOBP04114 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 CASC19-261ENST00000641853 1638 ntBASIC2.62□□□□□ -1.99
APOBP04114 RN7SKP74-201ENST00000362849 309 ntBASIC2.62□□□□□ -1.99
APOBP04114 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.62□□□□□ -1.99
APOBP04114 AL139247.1-201ENST00000422768 325 ntBASIC2.62□□□□□ -1.99
APOBP04114 EIF4HP2-201ENST00000424380 563 ntBASIC2.62□□□□□ -1.99
APOBP04114 AC092162.1-201ENST00000432828 434 ntBASIC2.62□□□□□ -1.99
APOBP04114 AL133244.1-201ENST00000456007 258 ntBASIC2.62□□□□□ -1.99
APOBP04114 SETP14-201ENST00000497538 873 ntBASIC2.62□□□□□ -1.99
APOBP04114 ATP1B1P1-201ENST00000509767 915 ntBASIC2.62□□□□□ -1.99
APOBP04114 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.62□□□□□ -1.99
APOBP04114 AL352979.3-201ENST00000553515 247 ntBASIC2.62□□□□□ -1.99
APOBP04114 MIR4660-201ENST00000583549 74 ntBASIC2.62□□□□□ -1.99
APOBP04114 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
APOBP04114 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
APOBP04114 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
APOBP04114 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
APOBP04114 SNORA48.2-201ENST00000390926 124 ntBASIC2.61□□□□□ -1.99
APOBP04114 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
APOBP04114 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBP04114 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
APOBP04114 MTND4LP31-201ENST00000514859 294 ntBASIC2.61□□□□□ -1.99
APOBP04114 AC140113.4-201ENST00000622087 222 ntBASIC2.61□□□□□ -1.99
APOBP04114 AC055839.1-201ENST00000634467 498 ntBASIC2.61□□□□□ -1.99
APOBP04114 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.61□□□□□ -1.99
APOBP04114 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
APOBP04114 U1.1-201ENST00000384101 164 ntBASIC2.61□□□□□ -1.99
APOBP04114 SOD2P1-201ENST00000396543 562 ntBASIC2.61□□□□□ -1.99
APOBP04114 AL031121.1-201ENST00000406553 254 ntBASIC2.61□□□□□ -1.99
APOBP04114 RN7SKP284-201ENST00000411002 343 ntBASIC2.61□□□□□ -1.99
APOBP04114 AC245052.5-201ENST00000416320 649 ntBASIC2.61□□□□□ -1.99
APOBP04114 Z74696.2-201ENST00000436514 498 ntBASIC2.61□□□□□ -1.99
APOBP04114 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.61□□□□□ -1.99
APOBP04114 AC012671.1-201ENST00000451912 203 ntBASIC2.61□□□□□ -1.99
APOBP04114 AC098799.3-201ENST00000506095 438 ntBASIC2.61□□□□□ -1.99
APOBP04114 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.61□□□□□ -1.99
APOBP04114 AC005034.4-201ENST00000603612 899 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms