Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 AL583835.1-201ENST00000399570 407 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.1□□□□□ -1.75
SPTA1P02549 RPS27AP13-201ENST00000498403 237 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 CAB39P1-201ENST00000502277 460 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.1□□□□□ -1.75
SPTA1P02549 MIR7975-201ENST00000619350 68 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SPTA1P02549 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SPTA1P02549 AL672167.1-205ENST00000641112 3080 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 AC092451.3-201ENST00000625067 1343 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 ZNF402P-201ENST00000404435 3100 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.09□□□□□ -1.75
SPTA1P02549 AC009643.2-201ENST00000603543 1448 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.09□□□□□ -1.75
SPTA1P02549 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SPTA1P02549 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SPTA1P02549 SNORA70.9-201ENST00000384370 135 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.09□□□□□ -1.75
SPTA1P02549 AL157884.3-201ENST00000448273 1184 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 AL591363.1-201ENST00000450091 483 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.09□□□□□ -1.75
SPTA1P02549 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.09□□□□□ -1.75
SPTA1P02549 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.09□□□□□ -1.75
SPTA1P02549 AC107982.3-201ENST00000584957 985 ntBASIC4.09□□□□□ -1.75
SPTA1P02549 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.09□□□□□ -1.75
SPTA1P02549 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SPTA1P02549 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SPTA1P02549 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.09□□□□□ -1.75
SPTA1P02549 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SPTA1P02549 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SPTA1P02549 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SPTA1P02549 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SPTA1P02549 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.09□□□□□ -1.76
SPTA1P02549 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SPTA1P02549 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SPTA1P02549 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SPTA1P02549 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.09□□□□□ -1.76
SPTA1P02549 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.09□□□□□ -1.76
SPTA1P02549 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SPTA1P02549 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.09□□□□□ -1.76
SPTA1P02549 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.09□□□□□ -1.76
SPTA1P02549 AL021997.2-201ENST00000615674 271 ntBASIC4.09□□□□□ -1.76
SPTA1P02549 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.09□□□□□ -1.76
SPTA1P02549 U6.105-201ENST00000637379 88 ntBASIC4.09□□□□□ -1.76
SPTA1P02549 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.08□□□□□ -1.76
SPTA1P02549 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 ZNF812P-201ENST00000457674 1694 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SPTA1P02549 OR6C71P-201ENST00000432580 913 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 PTMAP3-201ENST00000447474 330 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 AC098799.1-201ENST00000504752 800 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.08□□□□□ -1.76
SPTA1P02549 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.08□□□□□ -1.76
SPTA1P02549 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.08□□□□□ -1.76
SPTA1P02549 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SPTA1P02549 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
SPTA1P02549 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SPTA1P02549 ADAM24P-201ENST00000398655 2101 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.08□□□□□ -1.76
SPTA1P02549 AC092162.3-201ENST00000624511 1624 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 MAPK10-320ENST00000641462 6696 ntBASIC4.08□□□□□ -1.76
SPTA1P02549 AC008033.1-201ENST00000216407 1162 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SPTA1P02549 RPL23AP38-201ENST00000423801 469 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 AL590399.2-201ENST00000427536 309 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 AL136126.1-201ENST00000473603 402 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 RPS27AP1-201ENST00000475545 471 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.07□□□□□ -1.76
SPTA1P02549 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.07□□□□□ -1.76
SPTA1P02549 AC005618.4-201ENST00000625053 554 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SPTA1P02549 SOCS5P3-201ENST00000425115 1576 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.07□□□□□ -1.76
SPTA1P02549 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SPTA1P02549 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SPTA1P02549 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.07□□□□□ -1.76
SPTA1P02549 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms