Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RAPGEF3O95398 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RAPGEF3O95398 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RAPGEF3O95398 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RAPGEF3O95398 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.23□□□□□ -1.25
RAPGEF3O95398 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 MIR659-201ENST00000384963 97 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 RPS26P8-201ENST00000393490 348 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 SNORA11.1-201ENST00000408133 129 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 CBX1P3-201ENST00000413296 527 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AL158827.1-201ENST00000416300 391 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 BTF3P9-201ENST00000418784 283 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 LINC00993-201ENST00000420453 540 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 COX6CP13-201ENST00000428703 226 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 RPS17P11-201ENST00000474297 293 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AC068587.2-201ENST00000478386 781 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AC069306.1-201ENST00000507006 843 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 GOLGA5P1-201ENST00000507317 980 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AC109635.6-201ENST00000525487 1113 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 AL121839.1-201ENST00000556233 1185 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 MIR4509-3-201ENST00000578671 94 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 MIR4509-2-201ENST00000583920 94 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 AC011492.1-201ENST00000600023 315 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 AL121932.1-201ENST00000605542 214 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 MIR4509-1-201ENST00000618224 94 ntBASIC7.22□□□□□ -1.25
RAPGEF3O95398 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RAPGEF3O95398 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.22□□□□□ -1.25
RAPGEF3O95398 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
RAPGEF3O95398 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RAPGEF3O95398 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RAPGEF3O95398 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RAPGEF3O95398 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.25
RAPGEF3O95398 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
RAPGEF3O95398 STX3-208ENST00000641815 3236 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AP000547.3-204ENST00000588548 2523 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC002525.1-201ENST00000624392 1622 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 RNU6-354P-201ENST00000383862 107 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 RNU6-610P-201ENST00000384264 107 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 TCEA1P2-201ENST00000420496 906 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC241520.1-201ENST00000422654 1099 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 YWHAZP2-201ENST00000440317 728 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 RPL6P5-201ENST00000445678 828 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC090804.1-201ENST00000448870 490 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 HMGB1P26-201ENST00000452520 628 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC105137.1-201ENST00000484355 562 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 SUMO1P1-201ENST00000497904 306 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC118942.1-201ENST00000529674 1035 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 OR8R1P-201ENST00000543943 764 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC005034.4-201ENST00000603612 899 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC024220.1-201ENST00000603675 484 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC068769.1-201ENST00000474767 2426 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 OR14L1P-202ENST00000641545 3009 ntBASIC7.21□□□□□ -1.26
RAPGEF3O95398 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RAPGEF3O95398 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.21□□□□□ -1.26
RAPGEF3O95398 AC073365.1-203ENST00000641055 1992 ntBASIC7.2□□□□□ -1.26
RAPGEF3O95398 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RAPGEF3O95398 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RAPGEF3O95398 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RAPGEF3O95398 RNU6-468P-201ENST00000384003 109 ntBASIC7.2□□□□□ -1.26
RAPGEF3O95398 AL035079.1-201ENST00000405210 287 ntBASIC7.2□□□□□ -1.26
RAPGEF3O95398 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RAPGEF3O95398 UBE2V1P9-201ENST00000414760 368 ntBASIC7.2□□□□□ -1.26
RAPGEF3O95398 VN1R42P-201ENST00000424651 344 ntBASIC7.2□□□□□ -1.26
RAPGEF3O95398 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.2□□□□□ -1.26
RAPGEF3O95398 AC006994.1-201ENST00000438212 839 ntBASIC7.2□□□□□ -1.26
RAPGEF3O95398 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms