Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5□□□□□ -1.61
LDB2O43679 AC132825.7-201ENST00000638744 335 ntBASIC5□□□□□ -1.61
LDB2O43679 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LDB2O43679 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LDB2O43679 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
LDB2O43679 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LDB2O43679 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LDB2O43679 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LDB2O43679 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LDB2O43679 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDB2O43679 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDB2O43679 AC007342.7-201ENST00000624610 2337 ntBASIC4.99□□□□□ -1.61
LDB2O43679 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.99□□□□□ -1.61
LDB2O43679 AC017079.1-201ENST00000333650 415 ntBASIC4.99□□□□□ -1.61
LDB2O43679 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDB2O43679 RNA5SP305-201ENST00000362665 119 ntBASIC4.99□□□□□ -1.61
LDB2O43679 RNA5SP455-201ENST00000365190 119 ntBASIC4.99□□□□□ -1.61
LDB2O43679 RNA5SP105-201ENST00000391123 113 ntBASIC4.99□□□□□ -1.61
LDB2O43679 RNU4-74P-201ENST00000411280 161 ntBASIC4.99□□□□□ -1.61
LDB2O43679 UBE2V1P11-201ENST00000411559 285 ntBASIC4.99□□□□□ -1.61
LDB2O43679 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.99□□□□□ -1.61
LDB2O43679 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 HIGD1AP15-201ENST00000416198 280 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 PTP4A1P1-201ENST00000420539 515 ntBASIC4.99□□□□□ -1.61
LDB2O43679 XKRYP1-201ENST00000423438 492 ntBASIC4.99□□□□□ -1.61
LDB2O43679 NANOGP5-201ENST00000424456 877 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AL590762.4-201ENST00000425885 253 ntBASIC4.99□□□□□ -1.61
LDB2O43679 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.99□□□□□ -1.61
LDB2O43679 XKRYP2-201ENST00000432915 492 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 AC073052.1-201ENST00000440417 714 ntBASIC4.99□□□□□ -1.61
LDB2O43679 ARAFP2-201ENST00000440565 559 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC092647.3-201ENST00000443044 633 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 MTCYBP11-201ENST00000447254 1109 ntBASIC4.99□□□□□ -1.61
LDB2O43679 CYCSP42-201ENST00000450823 238 ntBASIC4.99□□□□□ -1.61
LDB2O43679 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.99□□□□□ -1.61
LDB2O43679 COX6B1P2-201ENST00000489624 230 ntBASIC4.99□□□□□ -1.61
LDB2O43679 RPS23P1-201ENST00000491662 432 ntBASIC4.99□□□□□ -1.61
LDB2O43679 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 AC093534.1-201ENST00000504977 132 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.99□□□□□ -1.61
LDB2O43679 AC004980.4-201ENST00000513375 203 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 MORF4L1P3-201ENST00000525966 950 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.99□□□□□ -1.61
LDB2O43679 MTCYBP23-201ENST00000558717 1102 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.99□□□□□ -1.61
LDB2O43679 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 MIR4646-201ENST00000580775 63 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC068020.1-201ENST00000594215 661 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC130352.1-201ENST00000602979 661 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC022022.2-201ENST00000602989 360 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC104687.2-201ENST00000604442 342 ntBASIC4.99□□□□□ -1.61
LDB2O43679 AC005377.1-201ENST00000605126 456 ntBASIC4.99□□□□□ -1.61
LDB2O43679 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.99□□□□□ -1.61
LDB2O43679 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LDB2O43679 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.99□□□□□ -1.61
LDB2O43679 HSPA8P18-201ENST00000439846 1928 ntBASIC4.99□□□□□ -1.61
LDB2O43679 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.99□□□□□ -1.61
LDB2O43679 ECM1P2-201ENST00000503354 1577 ntBASIC4.99□□□□□ -1.61
LDB2O43679 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDB2O43679 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LDB2O43679 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
LDB2O43679 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.98□□□□□ -1.61
LDB2O43679 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.98□□□□□ -1.61
LDB2O43679 SNORA73.1-201ENST00000363107 205 ntBASIC4.98□□□□□ -1.61
LDB2O43679 RNA5SP428-201ENST00000365129 132 ntBASIC4.98□□□□□ -1.61
LDB2O43679 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LDB2O43679 RPL5P19-201ENST00000404228 893 ntBASIC4.98□□□□□ -1.61
LDB2O43679 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.98□□□□□ -1.61
LDB2O43679 OR51B3P-201ENST00000412287 913 ntBASIC4.98□□□□□ -1.61
LDB2O43679 EIF4A1P1-201ENST00000420241 934 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AC006065.1-201ENST00000422539 802 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AC093422.3-201ENST00000428506 305 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.98□□□□□ -1.61
LDB2O43679 NDUFA5P10-201ENST00000432147 357 ntBASIC4.98□□□□□ -1.61
LDB2O43679 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.98□□□□□ -1.61
LDB2O43679 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.98□□□□□ -1.61
LDB2O43679 RPL12P18-201ENST00000437175 325 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AL772161.1-201ENST00000439130 476 ntBASIC4.98□□□□□ -1.61
LDB2O43679 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms