Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 MIR3667-201ENST00000581025 74 ntBASIC4.13□□□□□ -1.75
SGCEO43556 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.13□□□□□ -1.75
SGCEO43556 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.13□□□□□ -1.75
SGCEO43556 AC073137.1-201ENST00000605636 634 ntBASIC4.13□□□□□ -1.75
SGCEO43556 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.13□□□□□ -1.75
SGCEO43556 AC090948.2-201ENST00000607363 564 ntBASIC4.13□□□□□ -1.75
SGCEO43556 AC133644.2-201ENST00000608142 540 ntBASIC4.13□□□□□ -1.75
SGCEO43556 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.13□□□□□ -1.75
SGCEO43556 AC087385.3-201ENST00000620477 187 ntBASIC4.13□□□□□ -1.75
SGCEO43556 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 MIR6719-201ENST00000622428 87 ntBASIC4.13□□□□□ -1.75
SGCEO43556 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.13□□□□□ -1.75
SGCEO43556 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SGCEO43556 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SGCEO43556 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.13□□□□□ -1.75
SGCEO43556 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SGCEO43556 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.13□□□□□ -1.75
SGCEO43556 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.13□□□□□ -1.75
SGCEO43556 PHKBP1-201ENST00000450951 1951 ntBASIC4.13□□□□□ -1.75
SGCEO43556 AC092079.1-201ENST00000558620 1985 ntBASIC4.13□□□□□ -1.75
SGCEO43556 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.12□□□□□ -1.75
SGCEO43556 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.12□□□□□ -1.75
SGCEO43556 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SGCEO43556 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 AC011155.1-201ENST00000316512 456 ntBASIC4.12□□□□□ -1.75
SGCEO43556 RN7SKP115-201ENST00000363177 317 ntBASIC4.12□□□□□ -1.75
SGCEO43556 RNU1-83P-201ENST00000363426 164 ntBASIC4.12□□□□□ -1.75
SGCEO43556 SNORD96B-201ENST00000386148 79 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AL109941.1-201ENST00000401925 229 ntBASIC4.12□□□□□ -1.75
SGCEO43556 RNA5SP113-201ENST00000410486 84 ntBASIC4.12□□□□□ -1.75
SGCEO43556 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.12□□□□□ -1.75
SGCEO43556 RPL6P29-201ENST00000414863 865 ntBASIC4.12□□□□□ -1.75
SGCEO43556 RPS27P18-201ENST00000431701 247 ntBASIC4.12□□□□□ -1.75
SGCEO43556 NFYAP1-201ENST00000431953 972 ntBASIC4.12□□□□□ -1.75
SGCEO43556 NRBF2P3-201ENST00000432731 865 ntBASIC4.12□□□□□ -1.75
SGCEO43556 VN1R54P-201ENST00000435210 1049 ntBASIC4.12□□□□□ -1.75
SGCEO43556 RPL12P46-201ENST00000436610 195 ntBASIC4.12□□□□□ -1.75
SGCEO43556 H2AFZP5-201ENST00000446960 382 ntBASIC4.12□□□□□ -1.75
SGCEO43556 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.12□□□□□ -1.75
SGCEO43556 HIGD1AP8-201ENST00000453927 274 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AC090142.1-201ENST00000465776 462 ntBASIC4.12□□□□□ -1.75
SGCEO43556 SCARNA22-201ENST00000503991 125 ntBASIC4.12□□□□□ -1.75
SGCEO43556 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.12□□□□□ -1.75
SGCEO43556 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.12□□□□□ -1.75
SGCEO43556 AP001922.4-201ENST00000526967 290 ntBASIC4.12□□□□□ -1.75
SGCEO43556 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.12□□□□□ -1.75
SGCEO43556 NPM1P45-201ENST00000583151 559 ntBASIC4.12□□□□□ -1.75
SGCEO43556 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SGCEO43556 AL512782.1-201ENST00000603093 364 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AC008638.3-201ENST00000603341 463 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AL031320.1-201ENST00000604177 357 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AL391358.1-201ENST00000605342 190 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AL592494.3-201ENST00000609485 464 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AC078899.5-201ENST00000612475 178 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AC234782.5-201ENST00000617723 324 ntBASIC4.12□□□□□ -1.75
SGCEO43556 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.12□□□□□ -1.75
SGCEO43556 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SGCEO43556 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.12□□□□□ -1.75
SGCEO43556 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SGCEO43556 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.12□□□□□ -1.75
SGCEO43556 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SGCEO43556 KARSP3-201ENST00000571212 1504 ntBASIC4.11□□□□□ -1.75
SGCEO43556 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 AC015813.6-201ENST00000624409 5808 ntBASIC4.11□□□□□ -1.75
SGCEO43556 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SGCEO43556 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 SDAD1P1-202ENST00000524156 2051 ntBASIC4.11□□□□□ -1.75
SGCEO43556 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 RNU1-108P-201ENST00000362556 161 ntBASIC4.11□□□□□ -1.75
SGCEO43556 RNA5SP191-201ENST00000362585 102 ntBASIC4.11□□□□□ -1.75
SGCEO43556 SNORA74A-201ENST00000364089 198 ntBASIC4.11□□□□□ -1.75
SGCEO43556 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.11□□□□□ -1.75
SGCEO43556 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SGCEO43556 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.11□□□□□ -1.75
SGCEO43556 AC073648.4-201ENST00000442655 781 ntBASIC4.11□□□□□ -1.75
SGCEO43556 TDGF1P1-201ENST00000445734 527 ntBASIC4.11□□□□□ -1.75
SGCEO43556 RPL31P44-201ENST00000447680 377 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC091685.2-201ENST00000454924 864 ntBASIC4.11□□□□□ -1.75
SGCEO43556 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.11□□□□□ -1.75
SGCEO43556 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.11□□□□□ -1.75
SGCEO43556 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SGCEO43556 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.11□□□□□ -1.75
SGCEO43556 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms