Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC000123.2-201ENST00000623124 461 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
RIPK2O43353 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
RIPK2O43353 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RIPK2O43353 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RIPK2O43353 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RIPK2O43353 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.71□□□□□ -1.66
RIPK2O43353 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.71□□□□□ -1.66
RIPK2O43353 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 RNA5SP242-201ENST00000364171 118 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AP002530.1-201ENST00000405705 684 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 OR3A2-201ENST00000408891 1076 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC099535.1-201ENST00000408928 371 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC013404.1-201ENST00000413068 249 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.71□□□□□ -1.66
RIPK2O43353 MAPRE1P3-201ENST00000435438 796 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AL138899.2-201ENST00000439139 499 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.71□□□□□ -1.66
RIPK2O43353 OR52A4P-201ENST00000472867 958 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 OR2AO1P-201ENST00000476497 403 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 RN7SL741P-201ENST00000482473 289 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.71□□□□□ -1.66
RIPK2O43353 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC022882.1-201ENST00000532142 501 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.71□□□□□ -1.66
RIPK2O43353 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.71□□□□□ -1.66
RIPK2O43353 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.71□□□□□ -1.66
RIPK2O43353 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AL512329.2-201ENST00000607350 548 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AP002360.3-201ENST00000607673 710 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AP001521.2-201ENST00000608772 546 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC093799.2-201ENST00000610062 578 ntBASIC4.71□□□□□ -1.66
RIPK2O43353 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.71□□□□□ -1.66
RIPK2O43353 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.71□□□□□ -1.66
RIPK2O43353 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RIPK2O43353 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 OR14L1P-202ENST00000641545 3009 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 RNA5SP22-201ENST00000365393 109 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 MIR143-201ENST00000385300 106 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 SNORA17A-201ENST00000391185 133 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 NPM1P4-201ENST00000414095 812 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 GJA6P-201ENST00000415117 1042 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 RWDD4P2-201ENST00000426392 563 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 DYNLL1P7-201ENST00000429273 258 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.7□□□□□ -1.66
RIPK2O43353 AL606490.7-201ENST00000433136 191 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 AL627224.1-201ENST00000448334 444 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.7□□□□□ -1.66
RIPK2O43353 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 AC234781.3-201ENST00000452540 973 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 RWDD4P1-201ENST00000488019 565 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AC072052.1-201ENST00000496556 306 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 PPBPP1-201ENST00000510807 373 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.7□□□□□ -1.66
RIPK2O43353 AC092490.3-201ENST00000545370 572 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.7□□□□□ -1.66
RIPK2O43353 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.7□□□□□ -1.66
RIPK2O43353 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 AC023762.1-201ENST00000603280 584 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AL049844.2-201ENST00000604280 628 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AC135803.1-201ENST00000608748 565 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.7□□□□□ -1.66
RIPK2O43353 AC243654.2-201ENST00000612843 443 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 AC007342.8-201ENST00000623278 678 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 SNORA17.5-201ENST00000630429 132 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 CFTRP2-201ENST00000634304 199 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 MIR6715B-201ENST00000637172 77 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.7□□□□□ -1.66
RIPK2O43353 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK2O43353 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.7□□□□□ -1.66
RIPK2O43353 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms