Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LSM1O15116 AL445437.1-201ENST00000623157 3087 ntBASIC4.52□□□□□ -1.69
LSM1O15116 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
LSM1O15116 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.52□□□□□ -1.69
LSM1O15116 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 NCLP2-201ENST00000416078 1462 ntBASIC4.52□□□□□ -1.69
LSM1O15116 RNU4-4P-201ENST00000364588 130 ntBASIC4.52□□□□□ -1.69
LSM1O15116 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LSM1O15116 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LSM1O15116 CHEK2P3-201ENST00000416118 248 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.52□□□□□ -1.69
LSM1O15116 AC007064.3-201ENST00000422608 359 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.52□□□□□ -1.69
LSM1O15116 AL355433.1-201ENST00000422804 300 ntBASIC4.52□□□□□ -1.69
LSM1O15116 RPL12P46-201ENST00000436610 195 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.52□□□□□ -1.69
LSM1O15116 MYO5BP2-201ENST00000449815 1277 ntBASIC4.52□□□□□ -1.69
LSM1O15116 CLIC4P1-201ENST00000453177 535 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AL354710.1-201ENST00000453641 246 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AURKAPS2-201ENST00000454983 333 ntBASIC4.52□□□□□ -1.69
LSM1O15116 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LSM1O15116 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.52□□□□□ -1.69
LSM1O15116 GAPDHP56-201ENST00000506031 988 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.52□□□□□ -1.69
LSM1O15116 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
LSM1O15116 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.52□□□□□ -1.69
LSM1O15116 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
LSM1O15116 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.52□□□□□ -1.69
LSM1O15116 AC008147.3-201ENST00000548666 354 ntBASIC4.52□□□□□ -1.69
LSM1O15116 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.52□□□□□ -1.69
LSM1O15116 AL352979.3-201ENST00000553515 247 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.52□□□□□ -1.69
LSM1O15116 AL645927.2-201ENST00000618350 349 ntBASIC4.52□□□□□ -1.69
LSM1O15116 AC112694.2-201ENST00000623697 768 ntBASIC4.52□□□□□ -1.69
LSM1O15116 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.52□□□□□ -1.69
LSM1O15116 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.52□□□□□ -1.69
LSM1O15116 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LSM1O15116 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 MIR195-201ENST00000385194 87 ntBASIC4.51□□□□□ -1.69
LSM1O15116 MIR765-201ENST00000390226 114 ntBASIC4.51□□□□□ -1.69
LSM1O15116 RNU1-82P-201ENST00000390851 165 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC092642.1-201ENST00000392417 425 ntBASIC4.51□□□□□ -1.69
LSM1O15116 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 CYP4F29P-201ENST00000420685 446 ntBASIC4.51□□□□□ -1.69
LSM1O15116 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC093716.1-201ENST00000435923 377 ntBASIC4.51□□□□□ -1.69
LSM1O15116 RPL7P28-201ENST00000437739 740 ntBASIC4.51□□□□□ -1.69
LSM1O15116 PRPF38AP2-201ENST00000438179 851 ntBASIC4.51□□□□□ -1.69
LSM1O15116 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 AC011753.3-201ENST00000443436 406 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC112498.1-201ENST00000444401 332 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC073850.1-201ENST00000449243 255 ntBASIC4.51□□□□□ -1.69
LSM1O15116 PPIAP20-201ENST00000449839 135 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC010733.1-201ENST00000451515 401 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC079168.2-201ENST00000453977 416 ntBASIC4.51□□□□□ -1.69
LSM1O15116 RPL31P53-201ENST00000457065 348 ntBASIC4.51□□□□□ -1.69
LSM1O15116 SEPT14P1-201ENST00000458703 648 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC025164.1-201ENST00000496249 478 ntBASIC4.51□□□□□ -1.69
LSM1O15116 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 AC006499.3-201ENST00000506077 748 ntBASIC4.51□□□□□ -1.69
LSM1O15116 RNA5SP34-201ENST00000516887 130 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 HAUS8P1-201ENST00000549005 542 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 ATP5J2P6-201ENST00000565203 266 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC027281.1-201ENST00000574178 758 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.51□□□□□ -1.69
LSM1O15116 FAM27B-201ENST00000610601 213 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AL121612.2-201ENST00000612261 482 ntBASIC4.51□□□□□ -1.69
LSM1O15116 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.51□□□□□ -1.69
LSM1O15116 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.51□□□□□ -1.69
LSM1O15116 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.51□□□□□ -1.69
LSM1O15116 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.51□□□□□ -1.69
LSM1O15116 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LSM1O15116 AP001002.1-201ENST00000625148 1513 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms