Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUX2O14529 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.68□□□□□ -1.18
CUX2O14529 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUX2O14529 ENSAP1-201ENST00000392855 326 ntBASIC7.68□□□□□ -1.18
CUX2O14529 AL590704.1-201ENST00000402856 794 ntBASIC7.68□□□□□ -1.18
CUX2O14529 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.68□□□□□ -1.18
CUX2O14529 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.68□□□□□ -1.18
CUX2O14529 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.68□□□□□ -1.18
CUX2O14529 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.68□□□□□ -1.18
CUX2O14529 FKBP1BP1-201ENST00000553366 325 ntBASIC7.68□□□□□ -1.18
CUX2O14529 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.68□□□□□ -1.18
CUX2O14529 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.68□□□□□ -1.18
CUX2O14529 MIR6891-201ENST00000618788 93 ntBASIC7.68□□□□□ -1.18
CUX2O14529 MIR6852-201ENST00000621699 66 ntBASIC7.68□□□□□ -1.18
CUX2O14529 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.68□□□□□ -1.18
CUX2O14529 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC7.68□□□□□ -1.18
CUX2O14529 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CUX2O14529 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUX2O14529 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.67□□□□□ -1.18
CUX2O14529 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUX2O14529 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
CUX2O14529 ADAM5-202ENST00000399789 1942 ntBASIC7.67□□□□□ -1.18
CUX2O14529 AC011755.1-201ENST00000623763 2049 ntBASIC7.67□□□□□ -1.18
CUX2O14529 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUX2O14529 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.67□□□□□ -1.18
CUX2O14529 AL122016.1-201ENST00000403365 367 ntBASIC7.67□□□□□ -1.18
CUX2O14529 PPIAP13-201ENST00000434706 478 ntBASIC7.67□□□□□ -1.18
CUX2O14529 AL358832.1-201ENST00000497800 389 ntBASIC7.67□□□□□ -1.18
CUX2O14529 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.67□□□□□ -1.18
CUX2O14529 AC020634.1-201ENST00000608701 549 ntBASIC7.67□□□□□ -1.18
CUX2O14529 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CUX2O14529 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUX2O14529 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUX2O14529 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.67□□□□□ -1.18
CUX2O14529 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUX2O14529 NAMPTP1-201ENST00000440465 2514 ntBASIC7.66□□□□□ -1.18
CUX2O14529 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.66□□□□□ -1.18
CUX2O14529 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUX2O14529 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUX2O14529 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUX2O14529 DNM1P47-203ENST00000571780 12667 ntBASIC7.66□□□□□ -1.18
CUX2O14529 Z82217.1-201ENST00000625157 8149 ntBASIC7.66□□□□□ -1.18
CUX2O14529 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUX2O14529 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.66□□□□□ -1.18
CUX2O14529 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC7.66□□□□□ -1.18
CUX2O14529 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUX2O14529 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CUX2O14529 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.66□□□□□ -1.18
CUX2O14529 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.66□□□□□ -1.18
CUX2O14529 SOD1P3-201ENST00000518682 454 ntBASIC7.66□□□□□ -1.18
CUX2O14529 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.66□□□□□ -1.18
CUX2O14529 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC7.66□□□□□ -1.18
CUX2O14529 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.66□□□□□ -1.18
CUX2O14529 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.66□□□□□ -1.18
CUX2O14529 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.66□□□□□ -1.18
CUX2O14529 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUX2O14529 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUX2O14529 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUX2O14529 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUX2O14529 ATP5F1P4-201ENST00000397288 746 ntBASIC7.65□□□□□ -1.18
CUX2O14529 RN7SKP284-201ENST00000411002 343 ntBASIC7.65□□□□□ -1.18
CUX2O14529 RPS4XP12-201ENST00000461747 709 ntBASIC7.65□□□□□ -1.18
CUX2O14529 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.65□□□□□ -1.18
CUX2O14529 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.65□□□□□ -1.18
CUX2O14529 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.65□□□□□ -1.18
CUX2O14529 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC7.65□□□□□ -1.18
CUX2O14529 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
CUX2O14529 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUX2O14529 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CUX2O14529 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
CUX2O14529 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.65□□□□□ -1.19
CUX2O14529 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
CUX2O14529 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CUX2O14529 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CUX2O14529 FAM91A3P-201ENST00000456826 2544 ntBASIC7.64□□□□□ -1.19
CUX2O14529 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CUX2O14529 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.64□□□□□ -1.19
CUX2O14529 AL583835.1-201ENST00000399570 407 ntBASIC7.64□□□□□ -1.19
CUX2O14529 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CUX2O14529 MIR1289-1-201ENST00000408836 144 ntBASIC7.64□□□□□ -1.19
CUX2O14529 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.64□□□□□ -1.19
CUX2O14529 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC7.64□□□□□ -1.19
CUX2O14529 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CUX2O14529 IGKV2D-19-201ENST00000523346 262 ntBASIC7.64□□□□□ -1.19
CUX2O14529 AL049830.4-201ENST00000555149 351 ntBASIC7.64□□□□□ -1.19
CUX2O14529 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC7.64□□□□□ -1.19
CUX2O14529 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.64□□□□□ -1.19
CUX2O14529 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
CUX2O14529 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC7.64□□□□□ -1.19
CUX2O14529 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CUX2O14529 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CUX2O14529 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CUX2O14529 MIR331-201ENST00000362302 94 ntBASIC7.63□□□□□ -1.19
CUX2O14529 RPL21P67-201ENST00000402896 478 ntBASIC7.63□□□□□ -1.19
CUX2O14529 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.63□□□□□ -1.19
CUX2O14529 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.63□□□□□ -1.19
CUX2O14529 RPL23AP53-201ENST00000521854 457 ntBASIC7.63□□□□□ -1.19
CUX2O14529 AC005868.1-201ENST00000536421 331 ntBASIC7.63□□□□□ -1.19
CUX2O14529 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.63□□□□□ -1.19
CUX2O14529 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms