Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
FOXN3O00409 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXN3O00409 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FOXN3O00409 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
FOXN3O00409 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 MFSD8-220ENST00000641243 1422 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
FOXN3O00409 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 OR8V1P-201ENST00000395193 873 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.59□□□□□ -1.51
FOXN3O00409 RNU4-22P-201ENST00000411058 166 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 RPL35AP24-201ENST00000413846 330 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 HIGD1AP15-201ENST00000416198 280 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AL121878.1-201ENST00000418638 859 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC114814.2-201ENST00000419195 485 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXN3O00409 HIGD1AP12-201ENST00000427832 281 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.59□□□□□ -1.51
FOXN3O00409 GAPDHP58-201ENST00000438477 1006 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXN3O00409 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXN3O00409 VN1R25P-201ENST00000443385 738 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXN3O00409 ZNF886P-201ENST00000450781 723 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 RPL10P17-201ENST00000453852 316 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AL139824.2-201ENST00000458731 1095 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AL136038.1-201ENST00000497246 351 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 MYL12BP2-201ENST00000503948 512 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 RPS4XP20-201ENST00000505751 772 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXN3O00409 PGAM1P13-201ENST00000507497 754 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXN3O00409 RN7SKP287-201ENST00000516546 266 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXN3O00409 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXN3O00409 AC127381.1-201ENST00000555979 939 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXN3O00409 MIR4660-201ENST00000583549 74 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXN3O00409 AL583856.2-201ENST00000606298 543 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC079395.2-201ENST00000610982 737 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC109309.2-201ENST00000612597 332 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 AC118658.2-201ENST00000618697 459 ntBASIC5.59□□□□□ -1.51
FOXN3O00409 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXN3O00409 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXN3O00409 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXN3O00409 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
FOXN3O00409 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
FOXN3O00409 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
FOXN3O00409 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.59□□□□□ -1.52
FOXN3O00409 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXN3O00409 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 MTND4P10-201ENST00000446199 1363 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 SEPT7P7-201ENST00000420492 1301 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 CIR1P2-201ENST00000514821 1342 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 RNA5SP183-201ENST00000362452 119 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 U3.7-201ENST00000363668 216 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 RN7SKP224-201ENST00000364140 325 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
FOXN3O00409 Y_RNA.472-201ENST00000384322 102 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AL590290.1-201ENST00000405336 380 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXN3O00409 EI24P4-201ENST00000423683 1078 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC093655.2-201ENST00000425735 631 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXN3O00409 AL121776.1-201ENST00000429337 372 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 AL161722.2-201ENST00000434731 981 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC002542.1-201ENST00000440683 193 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXN3O00409 FHP1-201ENST00000442741 703 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXN3O00409 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXN3O00409 AC134050.1-201ENST00000495088 933 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AC108693.1-201ENST00000496068 432 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 HPRT1P2-201ENST00000505250 544 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXN3O00409 IGKV3D-34-201ENST00000522638 302 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXN3O00409 AC107918.3-201ENST00000533272 382 ntBASIC5.58□□□□□ -1.52
FOXN3O00409 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms