Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AL590763.1-201ENST00000398297 1545 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SLC28A1O00337 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 AL590762.2-201ENST00000395798 571 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 RN7SKP273-201ENST00000411392 314 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AL590609.2-201ENST00000421430 368 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AL645608.4-201ENST00000423619 154 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AC006326.1-201ENST00000445465 787 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 RPS6P2-201ENST00000454208 705 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 RNU6-1218P-201ENST00000458990 108 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 RPL7P48-201ENST00000461513 746 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 RNA5SP92-201ENST00000516437 110 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 AC004923.2-201ENST00000529649 369 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 LINC00557-201ENST00000563184 1279 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 MIR3691-201ENST00000578066 90 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC28A1O00337 SUMO2P14-201ENST00000604488 293 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 AC140113.4-201ENST00000622087 222 ntBASIC4.56□□□□□ -1.68
SLC28A1O00337 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SLC28A1O00337 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC28A1O00337 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SLC28A1O00337 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SLC28A1O00337 AC090017.1-201ENST00000548612 1779 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 CASC19-204ENST00000641001 2055 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC28A1O00337 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 U8.4-201ENST00000363626 134 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 RNU1-106P-201ENST00000384382 164 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 U3.30-201ENST00000391308 210 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 DPPA2P3-201ENST00000411853 655 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 CEACAMP8-201ENST00000413902 580 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 CHEK2P3-201ENST00000416118 248 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC093162.1-201ENST00000419682 124 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 OR2AM1P-201ENST00000422137 422 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 RPS26P47-201ENST00000427219 348 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 MTCO1P52-201ENST00000433928 531 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC092013.1-201ENST00000438795 332 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 PPIAP20-201ENST00000449839 135 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 RN7SL214P-201ENST00000487317 265 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 RPL37AP8-201ENST00000494116 276 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC005912.1-201ENST00000495392 255 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC025164.1-201ENST00000496249 478 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC025459.1-201ENST00000504072 156 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 SETP12-201ENST00000514068 805 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 RNU6-347P-201ENST00000516658 105 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 HAUS1P3-201ENST00000523909 662 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC28A1O00337 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC28A1O00337 AC022882.1-201ENST00000532142 501 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC107918.3-201ENST00000533272 382 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC28A1O00337 RPL21P7-201ENST00000557463 483 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC28A1O00337 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC28A1O00337 ATP5J2P6-201ENST00000565203 266 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC28A1O00337 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC28A1O00337 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC28A1O00337 AC011453.2-201ENST00000603737 729 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC090525.3-201ENST00000605601 189 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 AC073137.1-201ENST00000605636 634 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 FAM27B-201ENST00000610601 213 ntBASIC4.55□□□□□ -1.68
SLC28A1O00337 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SLC28A1O00337 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC28A1O00337 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SLC28A1O00337 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms