Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.2□□□□□ -1.74
UPK1AO00322 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.2□□□□□ -1.74
UPK1AO00322 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
UPK1AO00322 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.2□□□□□ -1.74
UPK1AO00322 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.2□□□□□ -1.74
UPK1AO00322 AL158196.1-201ENST00000616786 434 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AC006840.1-201ENST00000623069 542 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AC021106.3-201ENST00000623925 531 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
UPK1AO00322 OR2L1P-202ENST00000641567 1023 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 LINC01808-202ENST00000641680 1116 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPK1AO00322 LINC01355-201ENST00000566551 5444 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
UPK1AO00322 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPK1AO00322 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
UPK1AO00322 AC079741.1-201ENST00000321498 212 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 RNA5SP307-201ENST00000362863 116 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.19□□□□□ -1.74
UPK1AO00322 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.19□□□□□ -1.74
UPK1AO00322 RPEP2-201ENST00000432149 701 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.19□□□□□ -1.74
UPK1AO00322 AC069285.2-201ENST00000440210 275 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 ARAFP2-201ENST00000440565 559 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.19□□□□□ -1.74
UPK1AO00322 AC073264.2-201ENST00000448886 166 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AL162591.2-201ENST00000449634 317 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AC239798.3-201ENST00000454459 408 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.19□□□□□ -1.74
UPK1AO00322 RN7SL354P-201ENST00000469282 294 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AC016687.1-201ENST00000482574 353 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.19□□□□□ -1.74
UPK1AO00322 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.19□□□□□ -1.74
UPK1AO00322 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.19□□□□□ -1.74
UPK1AO00322 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 AL133243.1-201ENST00000614487 366 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.19□□□□□ -1.74
UPK1AO00322 MTND5P23-201ENST00000430812 1655 ntBASIC4.19□□□□□ -1.74
UPK1AO00322 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
UPK1AO00322 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPK1AO00322 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UPK1AO00322 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UPK1AO00322 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
UPK1AO00322 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.18□□□□□ -1.74
UPK1AO00322 OR4K15-201ENST00000305051 1216 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UPK1AO00322 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.18□□□□□ -1.74
UPK1AO00322 AC019050.1-201ENST00000418508 492 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 NPM1P26-201ENST00000426339 738 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.18□□□□□ -1.74
UPK1AO00322 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.18□□□□□ -1.74
UPK1AO00322 AL772161.1-201ENST00000439130 476 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.18□□□□□ -1.74
UPK1AO00322 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.18□□□□□ -1.74
UPK1AO00322 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.18□□□□□ -1.74
UPK1AO00322 AP000827.1-201ENST00000527814 258 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 AP006289.1-201ENST00000538089 277 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 AC084759.1-201ENST00000561168 290 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 AC069061.3-201ENST00000582254 823 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.18□□□□□ -1.74
UPK1AO00322 AL160290.3-201ENST00000604869 165 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 AC020634.1-201ENST00000608701 549 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 AC100847.1-201ENST00000611316 481 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.18□□□□□ -1.74
UPK1AO00322 AL049536.1-201ENST00000625043 744 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UPK1AO00322 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.18□□□□□ -1.74
UPK1AO00322 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 DHX40P1-201ENST00000588725 1412 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
UPK1AO00322 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.18□□□□□ -1.74
UPK1AO00322 AC011266.1-201ENST00000624119 3569 ntBASIC4.18□□□□□ -1.74
UPK1AO00322 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPK1AO00322 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms