Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.12□□□□□ -1.43
RFXAPO00287 AC116553.2-201ENST00000564203 463 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 ISCA1P3-201ENST00000577104 373 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.12□□□□□ -1.43
RFXAPO00287 AL683813.2-201ENST00000605245 502 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 MIR378J-201ENST00000611988 109 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 AC007014.2-201ENST00000615581 479 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 AC091953.3-201ENST00000623220 236 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
RFXAPO00287 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RFXAPO00287 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 AL132640.2-201ENST00000559968 1698 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 AC092326.2-201ENST00000624772 1561 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 AL391994.1-201ENST00000254724 282 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC016716.1-201ENST00000265882 708 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.11□□□□□ -1.43
RFXAPO00287 NACA3P-201ENST00000359690 648 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 CEACAMP8-201ENST00000413902 580 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 OR4K6P-201ENST00000416478 897 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.11□□□□□ -1.43
RFXAPO00287 RPS4XP16-201ENST00000427198 791 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.11□□□□□ -1.43
RFXAPO00287 AL049745.1-201ENST00000433953 286 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 MTND1P30-201ENST00000441241 901 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 RPS11P7-201ENST00000442125 465 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 SEPT14P24-201ENST00000447236 180 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 RN7SL352P-201ENST00000466002 277 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 CCDC11P1-201ENST00000503137 1162 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 HPRT1P2-201ENST00000505250 544 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.11□□□□□ -1.43
RFXAPO00287 AC104090.1-201ENST00000506341 1171 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.11□□□□□ -1.43
RFXAPO00287 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.11□□□□□ -1.43
RFXAPO00287 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.11□□□□□ -1.43
RFXAPO00287 AP000676.2-201ENST00000529711 301 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 DEFB130C-202ENST00000530001 230 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC022832.1-201ENST00000530718 645 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AP004607.2-201ENST00000533949 322 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC074029.1-201ENST00000552531 1044 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.11□□□□□ -1.43
RFXAPO00287 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.11□□□□□ -1.43
RFXAPO00287 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.11□□□□□ -1.43
RFXAPO00287 MTND1P37-201ENST00000636562 264 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RFXAPO00287 ZNF90P1-201ENST00000480493 1951 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 SNX18P3-202ENST00000565670 1750 ntBASIC6.11□□□□□ -1.43
RFXAPO00287 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.11□□□□□ -1.43
RFXAPO00287 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFXAPO00287 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 OFD1P17-201ENST00000437639 3018 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.1□□□□□ -1.43
RFXAPO00287 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
RFXAPO00287 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.1□□□□□ -1.43
RFXAPO00287 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 MFSD8-219ENST00000641228 2559 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 FGF7P2-201ENST00000332473 296 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 RNA5SP211-201ENST00000365516 117 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.1□□□□□ -1.43
RFXAPO00287 RNU6-116P-201ENST00000384042 109 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 CYB5AP4-201ENST00000396692 399 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFXAPO00287 AL512430.2-201ENST00000406786 339 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 GAPDHP42-201ENST00000406848 981 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 RNU4-64P-201ENST00000410795 131 ntBASIC6.1□□□□□ -1.43
RFXAPO00287 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms