Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AL132640.2-201ENST00000559968 1698 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RNA5SP131-201ENST00000365452 119 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RNA5SP167-201ENST00000365461 116 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 YWHAZP6-201ENST00000399764 738 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AL390316.1-201ENST00000406279 553 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RN7SKP199-201ENST00000410325 305 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 TMBIM7P-201ENST00000418074 855 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 MTCO2P1-201ENST00000424648 477 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RPL7P33-201ENST00000444159 742 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AL121877.1-201ENST00000453704 622 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 CYCSP53-201ENST00000455540 265 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RPS15AP1-201ENST00000457423 391 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC011225.1-201ENST00000457751 369 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC020890.1-201ENST00000491837 504 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC005412.2-201ENST00000492004 341 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 SNX5P1-201ENST00000505757 1041 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ENPP7P9-201ENST00000514456 627 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC027338.1-201ENST00000514840 825 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RNA5SP441-201ENST00000516809 88 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RNA5SP75-201ENST00000516841 111 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 SOD1P3-201ENST00000518682 454 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 MTCYBP28-201ENST00000566728 1132 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AL049634.3-201ENST00000604968 457 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 U91328.4-201ENST00000608919 517 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC116651.1-201ENST00000609724 556 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC092266.1-201ENST00000610958 165 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 MTND5P3-201ENST00000438536 1800 ntBASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB1P1B2RPK0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 XIAPP3-201ENST00000312918 795 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 ZNF603P-201ENST00000405613 487 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 RNU6-77P-201ENST00000410554 91 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 RMRPP5-201ENST00000411156 267 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AL139148.1-201ENST00000427122 680 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 OR2B7P-201ENST00000429302 934 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 UBE2V1P1-201ENST00000430836 445 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 HMGB3P24-201ENST00000433260 622 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AL161722.2-201ENST00000434731 981 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 VDAC2P4-201ENST00000452925 711 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 AC058823.1-201ENST00000485315 474 ntBASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB1P1B2RPK0 RN7SL362P-201ENST00000494228 267 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms