Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 AP001157.1-201ENST00000550837 2339 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC000374.1-201ENST00000434698 1745 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 MFSD8-242ENST00000641690 4199 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 YY1P1-201ENST00000427625 668 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN11AQ9UI33 RPL36AP13-201ENST00000457490 317 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 RPS7P7-201ENST00000463499 571 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AL591473.1-201ENST00000464297 313 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 AC017100.2-201ENST00000584628 355 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 TMEM30CP-203ENST00000637814 1035 ntBASIC5.55□□□□□ -1.52
SCN11AQ9UI33 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 AC090013.1-201ENST00000485147 480 ntBASIC5.54□□□□□ -1.52
SCN11AQ9UI33 RNA5SP360-201ENST00000516555 118 ntBASIC5.54□□□□□ -1.52
SCN11AQ9UI33 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 MAPK10-286ENST00000641208 8747 ntBASIC5.54□□□□□ -1.52
SCN11AQ9UI33 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN11AQ9UI33 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 RNA5SP130-201ENST00000364431 114 ntBASIC5.53□□□□□ -1.52
SCN11AQ9UI33 RN7SKP182-201ENST00000410772 298 ntBASIC5.53□□□□□ -1.52
SCN11AQ9UI33 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 RPL23AP46-201ENST00000438548 490 ntBASIC5.53□□□□□ -1.52
SCN11AQ9UI33 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 MIR2116-201ENST00000517221 80 ntBASIC5.53□□□□□ -1.52
SCN11AQ9UI33 OR7E10P-201ENST00000526420 991 ntBASIC5.53□□□□□ -1.52
SCN11AQ9UI33 OR8R1P-201ENST00000543943 764 ntBASIC5.53□□□□□ -1.52
SCN11AQ9UI33 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN11AQ9UI33 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 SNORA11.1-201ENST00000408133 129 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 ARAFP2-201ENST00000440565 559 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 PTMAP3-201ENST00000447474 330 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 RPL23AP81-201ENST00000455252 467 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 ATP5G1P3-201ENST00000463301 410 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 SNORA67.7-201ENST00000516664 135 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AC023632.4-201ENST00000517783 191 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 MIR4298-201ENST00000584380 73 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AC010503.3-201ENST00000594355 540 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 AC039056.2-201ENST00000622261 511 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 MAPK10-349ENST00000641767 3661 ntBASIC5.52□□□□□ -1.53
SCN11AQ9UI33 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN11AQ9UI33 CASC19-204ENST00000641001 2055 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms