Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 LINC02495-203ENST00000636704 242 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC079753.1-201ENST00000623243 3868 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AL022578.1-201ENST00000439330 1433 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 SAMMSON-210ENST00000641260 1308 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC015689.2-201ENST00000528172 1738 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 RNU6-666P-201ENST00000363499 107 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 RNU6-1066P-201ENST00000363573 105 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 Y_RNA.296-201ENST00000364930 108 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 FDPSP5-201ENST00000399474 1057 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 RPS24P12-201ENST00000402084 394 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 RN7SKP285-201ENST00000410137 318 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 Y_RNA.598-201ENST00000410480 95 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL513174.1-201ENST00000423182 629 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL034379.1-201ENST00000423216 253 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC007559.1-201ENST00000428736 355 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC104850.1-201ENST00000435940 476 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 RPL18AP17-201ENST00000455326 198 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 RANP2-201ENST00000456833 229 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 snoU109.1-201ENST00000459339 135 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 RPS12P20-201ENST00000464109 380 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC091564.1-201ENST00000464563 479 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 CBX5P1-201ENST00000468470 561 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 RN7SL456P-201ENST00000469290 295 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 TRBV8-2-201ENST00000475637 270 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 TRBV5-2-201ENST00000489095 273 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 HMGB1P28-201ENST00000507778 552 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AF131216.2-201ENST00000512316 564 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 SNORA18.6-201ENST00000516792 115 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC109635.6-201ENST00000525487 1113 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TPRX1P1-201ENST00000557620 319 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 SS18L2P2-201ENST00000583960 235 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC091488.1-201ENST00000604239 660 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AC010200.2-201ENST00000605098 235 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AP004247.3-201ENST00000608682 624 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL590282.1-201ENST00000610379 1136 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 AP001506.1-201ENST00000615444 211 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSU72Q9NP77 TUBBP10-201ENST00000427668 1301 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SSU72Q9NP77 AL592429.1-201ENST00000403909 1473 ntBASIC6.22□□□□□ -1.41
SSU72Q9NP77 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
SSU72Q9NP77 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSU72Q9NP77 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
SSU72Q9NP77 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.21□□□□□ -1.41
SSU72Q9NP77 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms