Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 MRPS21P7-201ENST00000566937 238 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 MIR3912-201ENST00000577566 105 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AL353778.1-201ENST00000603149 408 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AP003392.5-201ENST00000607857 415 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AP000255.1-201ENST00000610276 676 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC093783.1-201ENST00000612976 329 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SNORA11.6-201ENST00000619030 128 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC131159.1-201ENST00000621854 213 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 OR13C1P-202ENST00000641378 2919 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 RNA5SP46-201ENST00000362370 120 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 OR1L1-202ENST00000373686 1083 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 Y_RNA.465-201ENST00000384293 102 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 SNORD116-8-201ENST00000384365 95 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LYPLA1P3-201ENST00000402650 695 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL356131.1-201ENST00000405826 414 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC048351.1-201ENST00000420064 602 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 MFSD13B-201ENST00000420133 1290 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC093155.2-201ENST00000420734 937 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL133173.1-201ENST00000423458 397 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 COX7BP2-201ENST00000437976 242 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 CBX1P4-201ENST00000439415 457 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 RPS7P5-201ENST00000441482 581 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 FGF7P5-201ENST00000441829 291 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC104978.1-201ENST00000449387 391 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 Z99714.1-201ENST00000450463 807 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 HMGB1P4-201ENST00000455362 567 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL122001.1-201ENST00000457027 370 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC084754.1-201ENST00000463466 464 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 RNU6-416P-201ENST00000516265 103 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 RN7SKP99-201ENST00000517028 307 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 NRBF2P4-201ENST00000520874 850 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 MIR4666A-201ENST00000580160 79 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL133507.1-201ENST00000605269 557 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AP005137.2-201ENST00000609238 400 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AC105227.2-201ENST00000615075 605 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 AL355480.1-201ENST00000629041 99 ntBASIC5.4□□□□□ -1.54
TRIM54Q9BYV2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms