Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC073136.1-201ENST00000449426 2884 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 Y_RNA.333-201ENST00000365274 102 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 RNU6ATAC-201ENST00000408749 126 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC018644.1-201ENST00000429934 551 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 RPL23AP83-201ENST00000434984 473 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC090181.2-201ENST00000602975 672 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AL451086.1-201ENST00000605596 223 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 NOL8P1-201ENST00000508336 3529 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC099654.3-201ENST00000447087 1546 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AL607077.1-201ENST00000401718 499 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 EIF4HP2-201ENST00000424380 563 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 CKS1BP6-201ENST00000424932 240 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 COX6B1P7-201ENST00000430845 235 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AL157385.1-201ENST00000446973 268 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AL133547.1-201ENST00000448546 220 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 RNA5SP519-201ENST00000516480 119 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 IGKV2-23-201ENST00000518729 323 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC015912.2-201ENST00000571053 181 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 AC023762.1-201ENST00000603280 584 ntBASIC6.66□□□□□ -1.34
SCAPERQ9BY12 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCAPERQ9BY12 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.65□□□□□ -1.34
SCAPERQ9BY12 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.65□□□□□ -1.34
SCAPERQ9BY12 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCAPERQ9BY12 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCAPERQ9BY12 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCAPERQ9BY12 AC023632.6-201ENST00000624338 2177 ntBASIC6.65□□□□□ -1.34
SCAPERQ9BY12 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 SNORA63.1-201ENST00000362493 131 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AL157831.1-201ENST00000426134 473 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC004938.1-201ENST00000438468 308 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 ARAFP2-201ENST00000440565 559 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC104651.2-201ENST00000447549 528 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 RHEBP2-201ENST00000450289 600 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 PRSS3P4-201ENST00000453323 162 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC091564.1-201ENST00000464563 479 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 LSM1P2-201ENST00000604911 322 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AC100778.3-201ENST00000580060 1750 ntBASIC6.65□□□□□ -1.35
SCAPERQ9BY12 AL161912.2-201ENST00000565707 3007 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.64□□□□□ -1.35
SCAPERQ9BY12 ARAFP1-201ENST00000422172 605 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 RPL21P43-201ENST00000425440 472 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 AC099522.1-202ENST00000514718 367 ntBASIC6.64□□□□□ -1.35
SCAPERQ9BY12 RNU6-513P-201ENST00000516104 104 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms