Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKP4Q99569 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 AC008079.2-201ENST00000623543 20396 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKP4Q99569 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 AL590609.2-201ENST00000421430 368 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 RPL34P20-201ENST00000442771 351 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 TCEA1P3-201ENST00000443005 880 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 AC006326.1-201ENST00000445465 787 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 EIF4A1P11-201ENST00000451239 222 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 RNU7-27P-201ENST00000459281 62 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 NPM1P29-201ENST00000483112 803 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 HMGN2P25-201ENST00000486956 268 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 RN7SL441P-201ENST00000492388 296 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 ENPP7P11-201ENST00000505915 627 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.92□□□□□ -1.62
PKP4Q99569 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 RN7SKP260-201ENST00000516907 149 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.92□□□□□ -1.62
PKP4Q99569 C1DP5-201ENST00000525775 383 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 OR10G5P-201ENST00000532733 358 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC105254.2-201ENST00000603636 436 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 AL445435.1-201ENST00000604232 665 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.92□□□□□ -1.62
PKP4Q99569 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.92□□□□□ -1.62
PKP4Q99569 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKP4Q99569 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKP4Q99569 THAP12P4-201ENST00000528321 2266 ntBASIC4.92□□□□□ -1.62
PKP4Q99569 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKP4Q99569 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKP4Q99569 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKP4Q99569 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP4Q99569 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP4Q99569 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PKP4Q99569 RNU6-792P-201ENST00000363490 107 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 RNA5SP455-201ENST00000365190 119 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PKP4Q99569 SNORA77-201ENST00000408716 125 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 VN1R51P-201ENST00000411675 945 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.91□□□□□ -1.62
PKP4Q99569 Z68694.1-201ENST00000413929 841 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 GTF2IP5-201ENST00000414608 731 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 DDX39BP1-205ENST00000422507 192 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKP4Q99569 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP4Q99569 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP4Q99569 TXNP5-201ENST00000441043 315 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 RRM2P4-201ENST00000441721 562 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 XKRY2-201ENST00000442362 1093 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP4Q99569 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 RPS4XP14-201ENST00000493072 781 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 AC021146.5-201ENST00000503544 545 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.91□□□□□ -1.62
PKP4Q99569 MTCO3P27-201ENST00000514397 196 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 RNU6-1004P-201ENST00000516584 111 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 AC103833.1-201ENST00000517442 172 ntBASIC4.91□□□□□ -1.62
PKP4Q99569 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.91□□□□□ -1.62
PKP4Q99569 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms