Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIN3AQ96ST3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SIN3AQ96ST3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SIN3AQ96ST3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIN3AQ96ST3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SIN3AQ96ST3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.34□□□□□ -1.4
SIN3AQ96ST3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SIN3AQ96ST3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 RNU4-23P-201ENST00000362839 140 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 RNU1-132P-201ENST00000364300 164 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 RNA5SP509-201ENST00000364577 119 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 P2RY10P2-201ENST00000416730 913 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 RSL24D1P8-201ENST00000434442 492 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC013410.1-201ENST00000436223 1232 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AP002371.1-201ENST00000463604 433 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC041039.1-201ENST00000485656 536 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AP002981.1-201ENST00000517692 975 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC067805.1-201ENST00000559344 470 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AL390726.5-202ENST00000564800 256 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 MIR3138-201ENST00000585238 82 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 ELOCP28-201ENST00000590044 317 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 AP000843.1-201ENST00000624880 701 ntBASIC6.33□□□□□ -1.4
SIN3AQ96ST3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.33□□□□□ -1.4
SIN3AQ96ST3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 EIF2AP4-201ENST00000424793 1781 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 RN7SKP74-201ENST00000362849 309 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AL078604.1-201ENST00000404609 466 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 SNORA11F-201ENST00000408237 128 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 SEPT7P8-201ENST00000413308 775 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 MFSD13B-201ENST00000420133 1290 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 GAPDHP49-201ENST00000421421 961 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 RPS3AP54-201ENST00000435535 734 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 Z95152.1-201ENST00000453556 656 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 RN7SL691P-201ENST00000494487 301 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 SNRPGP1-201ENST00000553864 222 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 RPL21P7-201ENST00000557463 483 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 BX322635.1-201ENST00000605804 496 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 SNORA35B-201ENST00000607417 129 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AC012467.1-201ENST00000607740 256 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AC114781.5-201ENST00000615297 108 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 uc_338.13-201ENST00000618243 179 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AL118508.4-201ENST00000624142 1176 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AP003497.2-201ENST00000624220 967 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AC008013.2-202ENST00000637965 364 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 AL158163.1-201ENST00000603915 1649 ntBASIC6.32□□□□□ -1.4
SIN3AQ96ST3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SIN3AQ96ST3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 OR5T3-201ENST00000303059 1023 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC023141.6-201ENST00000429418 337 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 RPL23AP25-201ENST00000430973 463 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 XKRYP6-201ENST00000440468 1116 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 XKRYP3-201ENST00000442113 1116 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 MTCYBP14-201ENST00000457471 715 ntBASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SIN3AQ96ST3 AC009643.1-201ENST00000532030 391 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms