Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC020937.1-201ENST00000519677 1013 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AC009643.1-201ENST00000532030 391 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 TRAV8-5-201ENST00000537369 341 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 MIR6748-201ENST00000610433 71 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AL121890.3-201ENST00000618494 516 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 AP003497.2-201ENST00000624220 967 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.6□□□□□ -1.83
GAFA1Q96PS6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GAFA1Q96PS6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC105074.1-201ENST00000623380 3095 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 HCFC2P1-201ENST00000392864 1592 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 SNORD66.1-201ENST00000391230 76 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 NRBF2P2-201ENST00000413087 861 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 MFSD13B-201ENST00000420133 1290 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AL592293.2-201ENST00000422292 996 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 EIF1P3-201ENST00000423841 334 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 SKP1P3-201ENST00000429280 487 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC023141.6-201ENST00000429418 337 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 EIF2S2P2-201ENST00000447161 982 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 ABCF2P2-201ENST00000450549 296 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC034205.1-201ENST00000520621 638 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 C1GALT1P3-201ENST00000522049 819 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 PHBP17-201ENST00000528576 541 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AP001804.2-201ENST00000533932 910 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AL445363.3-201ENST00000623080 671 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC010435.1-201ENST00000623353 1177 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC019278.1-201ENST00000623516 479 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AL139254.3-201ENST00000641097 674 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 AC104260.2-201ENST00000623551 3497 ntBASIC3.59□□□□□ -1.83
GAFA1Q96PS6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
GAFA1Q96PS6 VPS35P1-201ENST00000563400 1518 ntBASIC3.59□□□□□ -1.84
GAFA1Q96PS6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
GAFA1Q96PS6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.59□□□□□ -1.84
GAFA1Q96PS6 AL158163.1-201ENST00000603915 1649 ntBASIC3.59□□□□□ -1.84
GAFA1Q96PS6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
GAFA1Q96PS6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AL592182.3-201ENST00000642132 3304 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AP001157.1-201ENST00000550837 2339 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 RNU4-25P-201ENST00000410569 230 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 RN7SKP97-201ENST00000410966 333 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 FAR2P2-201ENST00000413041 594 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC011933.1-201ENST00000413334 321 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 FAR2P4-202ENST00000425399 584 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AL157831.1-201ENST00000426134 473 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AL512326.1-201ENST00000443050 721 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC116533.1-201ENST00000459748 321 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC006064.5-201ENST00000541782 248 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AL109766.1-201ENST00000555080 552 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 MIR4284-201ENST00000578924 81 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC018690.1-201ENST00000608144 626 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 OFD1P8Y-201ENST00000449148 1433 ntBASIC3.58□□□□□ -1.84
GAFA1Q96PS6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GAFA1Q96PS6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 NOL8P1-201ENST00000508336 3529 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms