Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL691482.1-201ENST00000453255 87 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 CYCSP34-201ENST00000458172 304 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 RN7SL441P-201ENST00000492388 296 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 RPS4XP20-201ENST00000505751 772 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC113192.3-201ENST00000529152 742 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC027544.3-201ENST00000535082 757 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 CR383656.14-201ENST00000551951 406 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC005776.1-201ENST00000603164 290 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC087283.1-201ENST00000604029 1074 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AL008729.2-201ENST00000606393 473 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 RMST_10.1-201ENST00000616309 154 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AL691477.1-201ENST00000624398 162 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 U6.107-201ENST00000637108 79 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 TMSB4XP4-201ENST00000323496 618 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 HMGB3P18-201ENST00000406327 590 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 MTCO1P43-201ENST00000431831 488 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 BX323845.1-201ENST00000432417 179 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 PCNPP2-201ENST00000441651 455 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AL161636.2-201ENST00000445179 927 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 Z92846.1-201ENST00000456203 268 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 EIF2S2P5-201ENST00000457635 968 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC112206.1-201ENST00000468416 477 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 RPL23AP71-201ENST00000470966 469 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 CYCSP20-201ENST00000473154 315 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 RN7SL466P-201ENST00000497546 295 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC112518.2-201ENST00000508565 425 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC106806.2-201ENST00000509365 500 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 GTF2F2P1-201ENST00000511083 675 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 ENPP7P9-201ENST00000514456 627 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 RN7SKP70-201ENST00000516655 271 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AL049830.4-201ENST00000555149 351 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC090515.3-201ENST00000560431 315 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 MIR4512-201ENST00000583257 77 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 NF1P5-201ENST00000588287 448 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC125494.3-201ENST00000602759 455 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC069307.1-201ENST00000602820 447 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC245100.7-201ENST00000609678 442 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC131238.1-201ENST00000617135 328 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC127024.6-201ENST00000621598 424 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 AC016717.3-201ENST00000624730 554 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 SEC63P2-201ENST00000503863 1939 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
VPS33AQ96AX1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS33AQ96AX1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AL592437.2-201ENST00000421655 2434 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 RN7SKP113-201ENST00000363891 295 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 MIR600-201ENST00000385007 98 ntBASIC4.8□□□□□ -1.64
VPS33AQ96AX1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS33AQ96AX1 RNU2-6P-201ENST00000411404 190 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms