Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AL355852.1-201ENST00000454081 1771 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 PPIAP13-201ENST00000434706 478 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AP001804.2-201ENST00000533932 910 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 CR392039.5-201ENST00000623201 510 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AL356489.2-201ENST00000566968 3528 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AP001642.1-201ENST00000624727 2117 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 TRIM51GP-201ENST00000534741 1350 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SNORA73.2-201ENST00000364946 201 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 GOT2P5-201ENST00000433995 546 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC006363.1-201ENST00000603806 463 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC020978.9-201ENST00000624380 1141 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 AC083843.3-201ENST00000623679 2186 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 OSBPL9P1-201ENST00000604744 1469 ntBASIC2.99□□□□□ -1.93
ALMS1Q8TCU4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 TET1P1-201ENST00000426627 2301 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 PTMAP2-201ENST00000397627 327 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 ARAFP1-201ENST00000422172 605 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 HSFY1P1-201ENST00000423928 1178 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC099522.1-202ENST00000514718 367 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC005255.1-201ENST00000593748 216 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AL445363.3-201ENST00000623080 671 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 RNU1-14P-201ENST00000362759 152 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 RNA5SP151-201ENST00000365632 117 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 U8.11-201ENST00000384699 133 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 U8.12-201ENST00000384701 133 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 MIR483-201ENST00000385070 76 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AL691449.1-201ENST00000426570 421 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 HMGN2P31-201ENST00000432430 273 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 U8.18-201ENST00000459285 133 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 RNU6-352P-201ENST00000516908 107 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AL160281.1-201ENST00000605307 311 ntBASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ALMS1Q8TCU4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms