Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 AC092376.2-201ENST00000622621 4116 ntBASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SIMC1Q8NDZ2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL357752.1-201ENST00000412817 349 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL356320.2-201ENST00000417263 507 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 ISCA1P2-201ENST00000438679 421 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC092170.1-201ENST00000440211 356 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 PTENP1-201ENST00000447117 1215 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC104978.1-201ENST00000449387 391 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 UBFD1P1-201ENST00000473259 814 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 RN7SL809P-201ENST00000482040 297 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC026414.1-201ENST00000504046 698 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC010285.3-201ENST00000511668 676 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 MTND5P13-201ENST00000513046 1079 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC110775.1-201ENST00000513721 462 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 RNU6-513P-201ENST00000516104 104 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 RNA5SP271-201ENST00000516700 88 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 TMEM97P2-201ENST00000517841 403 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 LSM3P2-201ENST00000551246 273 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC126615.2-201ENST00000553003 515 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL354943.1-201ENST00000572103 781 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 MTATP6P3-201ENST00000581686 676 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 MIR4801-201ENST00000582704 82 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC018809.2-201ENST00000602436 3823 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL139099.4-201ENST00000614802 114 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC015726.3-201ENST00000624501 418 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 AL445437.1-201ENST00000623157 3087 ntBASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SIMC1Q8NDZ2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 AP000756.2-201ENST00000624168 2567 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 AC100871.1-201ENST00000507871 1456 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 AC104964.3-201ENST00000606115 2860 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 TMSB4XP4-201ENST00000323496 618 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 RNU4-75P-201ENST00000364621 146 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 Y_RNA.472-201ENST00000384322 102 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 AC087752.1-201ENST00000391360 558 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 NCSTNP1-201ENST00000406229 144 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 SETP15-201ENST00000412724 337 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 AF274854.1-201ENST00000413236 615 ntBASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.41□□□□□ -1.54
SIMC1Q8NDZ2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms