Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 Z98755.1-201ENST00000407015 1384 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 VN2R3P-201ENST00000422626 1412 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AL442128.2-201ENST00000620246 1824 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 SNORD116-2-201ENST00000384274 95 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 SNORD116-6-201ENST00000384711 96 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 MIR600-201ENST00000385007 98 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 RPL17P50-201ENST00000396131 546 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 RPL23AP59-201ENST00000399415 461 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 RPL23AP17-201ENST00000401064 499 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AP000357.1-201ENST00000409926 1165 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 RN7SKP151-201ENST00000410230 316 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 USP9YP11-201ENST00000427537 717 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 EEF1A1P39-201ENST00000440791 250 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC079922.1-201ENST00000443291 359 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 HMGB3P6-201ENST00000444896 598 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AL035407.2-201ENST00000454090 378 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 RPS6P2-201ENST00000454208 705 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC119751.1-201ENST00000513357 765 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC006518.2-201ENST00000542513 940 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC061975.8-201ENST00000587058 721 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 VN1R78P-201ENST00000597393 564 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC013444.2-201ENST00000603317 787 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AL391358.1-201ENST00000605342 190 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC107952.2-201ENST00000606048 486 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC093388.1-201ENST00000609166 430 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC078883.4-201ENST00000623218 367 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC026422.1-201ENST00000623961 452 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 ASNSP1-204ENST00000641977 1664 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 AC007996.1-201ENST00000620414 2821 ntBASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SMC1BQ8NDV3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC022893.2-201ENST00000564832 3296 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 RNU4-51P-201ENST00000364206 140 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 SNORD65C-201ENST00000390962 71 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 MCTS2P-201ENST00000394552 546 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 BTF3P8-201ENST00000414577 526 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC246680.2-201ENST00000422106 389 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 TMEM183AP1-205ENST00000432739 290 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 RPL5P25-201ENST00000441148 775 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC244505.3-201ENST00000454598 187 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 snoU13.29-201ENST00000459370 104 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC034236.1-201ENST00000469891 373 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC140172.1-201ENST00000502928 141 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.4□□□□□ -1.38
SMC1BQ8NDV3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms