Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC093084.1-201ENST00000424233 687 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC079807.1-201ENST00000429993 481 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 FAM96AP1-201ENST00000430879 482 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 MTCYBP29-201ENST00000436327 1006 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 CR769776.1-201ENST00000441254 787 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 CYCSP24-201ENST00000445119 316 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC008280.2-201ENST00000455473 307 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC113420.1-201ENST00000507903 571 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC145350.1-201ENST00000567426 208 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC008536.1-201ENST00000602872 669 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC231759.1-201ENST00000616455 597 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC026124.2-201ENST00000621847 656 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AP003485.2-201ENST00000623636 610 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 SNORA17.5-201ENST00000630429 132 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 SAMMSON-209ENST00000641222 1100 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC133552.1-201ENST00000569988 4007 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 SNORD56.4-201ENST00000363883 71 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RNU6-1263P-201ENST00000384601 106 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AL390316.1-201ENST00000406279 553 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AL513325.1-201ENST00000417716 1034 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AL449283.1-202ENST00000418249 604 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC234781.4-201ENST00000419384 244 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 EI24P4-201ENST00000423683 1078 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC009238.2-201ENST00000431026 355 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RPS29P10-201ENST00000439197 166 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC092647.3-201ENST00000443044 633 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 CYCSP42-201ENST00000450823 238 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 RPL5P13-201ENST00000462840 709 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 ARL4AP1-201ENST00000503220 705 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC012400.1-201ENST00000518452 381 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AP002884.5-201ENST00000595053 1132 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 PCNAP1-202ENST00000595299 752 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC087283.1-201ENST00000604029 1074 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 AC092954.1-201ENST00000609121 445 ntBASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP4Q8N3C7 PART1_2.1-201ENST00000612397 250 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms