Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL139415.2-201ENST00000431968 163 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 BMS1P10-201ENST00000443754 1120 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 ST13P20-201ENST00000447996 1065 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RPS7P6-201ENST00000485777 579 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC111193.1-201ENST00000504097 155 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 ATP1B1P1-201ENST00000509767 915 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC093281.2-201ENST00000510153 597 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 CYP4F27P-201ENST00000514557 494 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 FABP5P5-201ENST00000515537 406 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-1225P-201ENST00000516336 65 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 HMGB1P23-201ENST00000518743 568 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AP003392.2-201ENST00000527269 208 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AP002812.4-201ENST00000532139 286 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 PCNAP4-201ENST00000532690 730 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC079600.1-201ENST00000550326 297 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL357078.3-201ENST00000607528 618 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-84P-201ENST00000607737 102 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC004948.1-201ENST00000609858 672 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC109347.2-201ENST00000610220 349 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 MIR6809-201ENST00000612189 116 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 uc_338.26-201ENST00000612659 160 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC025594.3-201ENST00000613068 790 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL356266.1-201ENST00000623311 483 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC099654.13-201ENST00000639774 207 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC005725.1-201ENST00000577346 2607 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC092447.7-201ENST00000422212 1621 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 HMGB1P5-201ENST00000255320 642 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 RNA5SP435-201ENST00000364044 108 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 RN7SKP128-201ENST00000364270 303 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC136624.1-201ENST00000400791 413 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 NPM1P38-201ENST00000403835 865 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC016739.1-201ENST00000405359 345 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 PIGPP2-201ENST00000411569 458 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 GAPDHP49-201ENST00000421421 961 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL035660.1-201ENST00000422041 222 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC126120.1-201ENST00000431082 470 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 NEK4P1-201ENST00000433383 879 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 RN7SL269P-201ENST00000467795 305 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 SLC25A51P1-201ENST00000468432 871 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 TRBV8-2-201ENST00000475637 270 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 VPS26AP1-201ENST00000483197 979 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC073610.1-201ENST00000489971 396 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AP001207.1-201ENST00000524051 481 ntBASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM48Q8IWZ4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms