Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 CD24P2-201ENST00000565486 219 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC068790.7-201ENST00000602347 528 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AL162431.4-201ENST00000604674 411 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AL158050.2-201ENST00000605336 568 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC090525.3-201ENST00000605601 189 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC011374.2-201ENST00000607135 526 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC244107.2-201ENST00000611773 76 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 VN1R9P-201ENST00000614184 867 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC091932.2-201ENST00000623014 291 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 TMEM30CP-203ENST00000637814 1035 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 Z98755.1-201ENST00000407015 1384 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 CCT8P1-201ENST00000413611 1657 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RNA5SP191-201ENST00000362585 102 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RNU6-1005P-201ENST00000384519 107 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 HMGN2P27-201ENST00000427352 270 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RPS27AP16-201ENST00000492222 470 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC010503.3-201ENST00000594355 540 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AL512782.1-201ENST00000603093 364 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RNU6-1192P-201ENST00000612197 107 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RNU6-489P-201ENST00000618289 107 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC138965.3-201ENST00000623875 498 ntBASIC5.54□□□□□ -1.52
HERC6Q8IVU3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HERC6Q8IVU3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 DDX18P4-201ENST00000511690 1966 ntBASIC5.53□□□□□ -1.52
HERC6Q8IVU3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HERC6Q8IVU3 AC002525.1-201ENST00000624392 1622 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms