Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC023509.5-201ENST00000617434 807 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC090510.2-201ENST00000617465 629 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC50Q8IVM0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC50Q8IVM0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RNU6-1320P-201ENST00000390838 107 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RNU6-1269P-201ENST00000391139 107 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 Z98745.1-201ENST00000402553 494 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RAC1P3-201ENST00000416129 580 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RNU6-599P-201ENST00000459383 107 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RNU6-1193P-201ENST00000459461 107 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 ATP5G1P3-201ENST00000463301 410 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RN7SL177P-201ENST00000476596 299 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RPS4XP14-201ENST00000493072 781 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RN7SL652P-201ENST00000577769 300 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC008759.1-201ENST00000589783 983 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AL391358.1-201ENST00000605342 190 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RNU6-368P-201ENST00000620928 107 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 RNU6-538P-201ENST00000622329 107 ntBASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC50Q8IVM0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 RNA5SP513-201ENST00000364648 118 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 SNORA51.8-201ENST00000384234 132 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 RNU6-1263P-201ENST00000384601 106 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 RN7SKP267-201ENST00000410381 285 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 OR51B3P-201ENST00000412287 913 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 COX6B1P1-201ENST00000415962 213 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 RCC2P2-201ENST00000422174 918 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC007559.1-201ENST00000428736 355 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC097523.2-201ENST00000435551 652 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 RPL7P33-201ENST00000444159 742 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC063943.1-201ENST00000465434 453 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 SCARNA22-201ENST00000503991 125 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC006499.6-201ENST00000511169 607 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 RNU2-30P-201ENST00000516209 141 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 EDDM3DP-201ENST00000554692 434 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AP000894.4-201ENST00000610185 483 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AC026368.1-201ENST00000614934 690 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AP003499.2-201ENST00000624100 483 ntBASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC50Q8IVM0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 RNU6-729P-201ENST00000384399 107 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.81□□□□□ -1.64
CCDC50Q8IVM0 RSU1P3-201ENST00000412878 835 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms