Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 HMGB3P7-201ENST00000400214 611 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AL035079.1-201ENST00000405210 287 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 U3.32-201ENST00000408116 212 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 BTF3P8-201ENST00000414577 526 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 LINC01881-201ENST00000416103 412 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 KRR1P1-201ENST00000419430 803 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC005005.2-201ENST00000420779 380 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 OR5M12P-201ENST00000423388 929 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC022022.1-201ENST00000430304 178 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 YWHAEP5-201ENST00000431545 765 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC092170.1-201ENST00000440211 356 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 GTF3AP5-201ENST00000442645 697 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 RNU7-140P-201ENST00000459546 60 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 NAP1L1P3-201ENST00000462291 880 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC079203.1-201ENST00000487972 404 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC023050.1-201ENST00000498198 304 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC083923.1-201ENST00000523708 376 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 OR7E128P-201ENST00000532736 1024 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC023538.1-201ENST00000534576 736 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC090022.1-201ENST00000546569 311 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC095057.3-201ENST00000567102 1157 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 RN7SL435P-201ENST00000584418 282 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 CCDC58P3-201ENST00000590792 430 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 ELOCP35-201ENST00000604289 336 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC100767.2-201ENST00000604840 693 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AL451049.1-201ENST00000608672 497 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AL121895.2-201ENST00000619558 447 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC022106.2-201ENST00000620114 757 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC019226.2-201ENST00000625973 424 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 AC074101.1-201ENST00000637861 241 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.68□□□□□ -1.66
SHFQ7M4L6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHFQ7M4L6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SHFQ7M4L6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC006210.2-201ENST00000367074 1545 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 VPS35P1-201ENST00000563400 1518 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 BTBD10P1-201ENST00000549824 1352 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 MAPK10-349ENST00000641767 3661 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 RLIMP2-201ENST00000427891 1563 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 RNU6-353P-201ENST00000364266 108 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 Y_RNA.472-201ENST00000384322 102 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 SNORD116-12-201ENST00000384468 92 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 OR8V1P-201ENST00000395193 873 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AL035419.1-201ENST00000397037 564 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC099535.1-201ENST00000408928 371 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC007738.1-201ENST00000413892 348 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 TAF13P2-201ENST00000416876 286 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 C1DP1-201ENST00000426049 402 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AL389925.1-201ENST00000432257 728 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC004022.1-201ENST00000447766 1066 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC094085.1-201ENST00000468914 584 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 PFN1P8-201ENST00000497012 543 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC090638.1-201ENST00000498296 909 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC093890.1-201ENST00000502554 540 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.67□□□□□ -1.66
SHFQ7M4L6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHFQ7M4L6 AC006427.1-201ENST00000514359 712 ntBASIC4.67□□□□□ -1.66
SHFQ7M4L6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms