Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC005034.4-201ENST00000603612 899 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL627230.1-201ENST00000613077 211 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL591926.8-201ENST00000616876 211 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC091304.6-201ENST00000619761 202 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AP000542.2-201ENST00000623199 6179 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ZNF549Q6P9A3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
ZNF549Q6P9A3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ZNF549Q6P9A3 AC010266.2-201ENST00000564741 3255 ntBASIC4.96□□□□□ -1.61
ZNF549Q6P9A3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 SNURFL-201ENST00000309296 343 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 RNU6-697P-201ENST00000363348 107 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 RNU6-481P-201ENST00000384194 107 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 SNORA70.10-201ENST00000384515 134 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL078595.1-201ENST00000404458 226 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 U3.36-201ENST00000408418 213 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL158825.1-201ENST00000414735 521 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 LIPT1P1-201ENST00000415870 1186 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL121878.1-201ENST00000418638 859 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC016907.1-201ENST00000419483 435 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 OSTCP5-201ENST00000425293 453 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC005033.1-201ENST00000428904 813 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 FABP5P3-201ENST00000437960 408 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 MTND1P29-201ENST00000448112 647 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 NPM1P21-201ENST00000513394 762 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC005868.1-201ENST00000536421 331 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 DUXAP6-201ENST00000553858 601 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC007225.2-201ENST00000562529 256 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 VN1R78P-201ENST00000597393 564 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC010620.1-201ENST00000601088 1102 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC096586.1-201ENST00000610267 561 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 Z95327.3-201ENST00000610385 572 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL139407.1-201ENST00000613826 1175 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 MIR6886-201ENST00000619864 61 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AC105105.5-201ENST00000622635 1294 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 AL929601.4-201ENST00000613011 1341 ntBASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZNF549Q6P9A3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 MIR365B-201ENST00000362317 111 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 RPL10P10-201ENST00000403509 664 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 SNORA79B-201ENST00000410557 148 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms