Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AP000936.3-201ENST00000438127 255 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 AF228730.2-201ENST00000438784 848 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 H2AFZP5-201ENST00000446960 382 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 RPL21P71-201ENST00000465598 459 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 RN7SL585P-201ENST00000470538 280 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 EIF4E2P2-201ENST00000492033 736 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 DUX4L52-201ENST00000549363 777 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 AC138207.8-204ENST00000579588 527 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MRPL54Q6P161 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 OR6R2P-201ENST00000609216 300 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 AL096712.1-201ENST00000614561 159 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 AP002505.2-201ENST00000623585 696 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MRPL54Q6P161 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
MRPL54Q6P161 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MRPL54Q6P161 AC022306.1-201ENST00000560489 1562 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 HSPA8P1-201ENST00000425843 1833 ntBASIC3.32□□□□□ -1.88
MRPL54Q6P161 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
MRPL54Q6P161 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MRPL54Q6P161 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
MRPL54Q6P161 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 AL451142.2-201ENST00000429076 2090 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 SNURFL-201ENST00000309296 343 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MRPL54Q6P161 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 OR51B3P-201ENST00000412287 913 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AL159169.1-201ENST00000421119 127 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 RPS3P2-201ENST00000421346 701 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 ABCF2P2-201ENST00000450549 296 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 EIF4A1P11-201ENST00000451239 222 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 SNORA70.14-201ENST00000516205 110 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 Vault.2-201ENST00000516519 98 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 RPL23AP97-201ENST00000568955 471 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC100767.2-201ENST00000604840 693 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC104695.2-201ENST00000605056 775 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC017076.1-201ENST00000607613 578 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 MIR6774-201ENST00000614651 70 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 RN7SL722P-201ENST00000617780 284 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 RN7SL565P-201ENST00000618246 284 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AL158062.1-201ENST00000619632 745 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 CR381572.2-201ENST00000624852 397 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPL54Q6P161 AC007529.1-201ENST00000418574 2178 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 AL049555.1-201ENST00000562834 1933 ntBASIC3.31□□□□□ -1.88
MRPL54Q6P161 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 SNORA62.2-201ENST00000364672 152 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 Z98745.1-201ENST00000402553 494 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 HSPE1P27-201ENST00000430808 296 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 RPEP2-201ENST00000432149 701 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPL54Q6P161 AL138899.2-201ENST00000439139 499 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 DNAJA1P5-201ENST00000440278 943 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 MYO5BP2-201ENST00000449815 1277 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 AC010733.1-201ENST00000451515 401 ntBASIC3.3□□□□□ -1.88
MRPL54Q6P161 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL54Q6P161 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms